Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0089
(681 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 27 0.72
DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein. 26 1.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 1.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 5.1
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 5.1
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 6.7
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 6.7
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 6.7
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 6.7
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 6.7
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 23 8.9
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 23 8.9
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 26.6 bits (56), Expect = 0.72
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 387 HSFKRMGLDLSGVNVLPIL*HREMLDVLKSISFNLLTMVSTTV 515
HS G+DL LP H + I+FNLL+ ST V
Sbjct: 439 HSALVRGMDLMDDMPLPYHDHNHHNSPMSPINFNLLSAASTAV 481
>DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein.
Length = 304
Score = 25.8 bits (54), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -3
Query: 340 KGSGITLSEFLTKRRHDIFMSARQRFGVTR-----CWTRDGCVYVQGSDGVRH 197
+G+ + +S F RR D + + +RF R C R GC ++ + G R+
Sbjct: 240 RGTTVVVSLFALHRRKDFWGADAERFDPDRFLSERCKNRMGCAFMPFNTGSRN 292
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 232 CVYVQGSDGVRHRVEVMSDLDALAK 158
C YV S GV EVM +D LA+
Sbjct: 87 CCYVSPSAGVSEFEEVMQRIDVLAR 111
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.8 bits (49), Expect = 5.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 224 VNAAVPSPAPGYSEALTCRHKNIMTSFSQEL 316
VN + PGYS TC + T+F EL
Sbjct: 314 VNEFAKTSLPGYSRWRTCSVREKDTAFVSEL 344
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.8 bits (49), Expect = 5.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 551 RCS*TTERGHFSYSCRN 501
RC ERGH +++CR+
Sbjct: 476 RCYRCLERGHLAHACRS 492
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 671 SCF*NFHSECASCTTDSSG 615
SCF ++ + CTTD++G
Sbjct: 8 SCFDSWSGDNCECTTDTTG 26
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 671 SCF*NFHSECASCTTDSSG 615
SCF ++ + CTTD++G
Sbjct: 8 SCFDSWSGDNCECTTDTTG 26
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 671 SCF*NFHSECASCTTDSSG 615
SCF ++ + CTTD++G
Sbjct: 8 SCFDSWSGDNCECTTDTTG 26
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 671 SCF*NFHSECASCTTDSSG 615
SCF ++ + CTTD++G
Sbjct: 8 SCFDSWSGDNCECTTDTTG 26
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 671 SCF*NFHSECASCTTDSSG 615
SCF ++ + CTTD++G
Sbjct: 584 SCFDSWSGDNCECTTDTTG 602
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.0 bits (47), Expect = 8.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 421 PERSRPILLKLCDMN 377
P R+RP LL CD N
Sbjct: 75 PSRNRPKLLTQCDSN 89
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 23.0 bits (47), Expect = 8.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 566 NSSDTRCS*TTERGHFSYSCRN 501
N RC ERGH + CR+
Sbjct: 358 NLQQQRCYRCLERGHIARECRS 379
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,592
Number of Sequences: 2352
Number of extensions: 14778
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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