Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0089
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S72487-2|AAD14106.1| 157|Homo sapiens orf3 5' of PD-ECGF/TP pro... 33 1.2
BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein. 31 5.0
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 31 5.0
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 31 5.0
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 31 5.0
AB075859-1|BAB85565.1| 309|Homo sapiens KIAA1979 protein protein. 30 6.6
BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein. 30 8.8
AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein. 30 8.8
AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein. 30 8.8
AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein. 30 8.8
AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein. 30 8.8
AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein. 30 8.8
AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein. 30 8.8
AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin prec... 30 8.8
AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin prec... 30 8.8
AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein. 30 8.8
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 30 8.8
>S72487-2|AAD14106.1| 157|Homo sapiens orf3 5' of PD-ECGF/TP
protein.
Length = 157
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +1
Query: 40 RTNTTSCSQPHVLVWSQLQTPLCPCRFVPSFEQHLPA*SSWQEHPDQTSLRHDVAPHPIP 219
R T + PH WS P P R S E HL E P T R+ V P+P
Sbjct: 58 RPPTPLSALPHSGTWSGPPGPWPPQRRTASREAHLGTPDLNPESPSDTLTRYSVPPYPDL 117
Query: 220 ERKRSRPE--SSTWL 258
+ + P +WL
Sbjct: 118 KSQTPNPRGFDKSWL 132
>BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein.
Length = 686
Score = 30.7 bits (66), Expect = 5.0
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Frame = -3
Query: 529 EDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPIL-LKLCDMNLRSKVWAA 353
EDTL ++E + +F +N+ + + E S I LK+ D + R K+
Sbjct: 226 EDTLQWLIEFVELPQYEKNFRDNNVKGT-TLPRIAVHEPSFMISQLKISDRSHRQKL--- 281
Query: 352 KTSLKGSGITLSEFLTKRRH----DIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEV 185
LK + L LT+ H D ++ GV CW Y Q H ++
Sbjct: 282 --QLKALDVVLFGPLTRPPHNWMKDFILTVSIVIGVGGCWF----AYTQNKTSKEHVAKM 335
Query: 184 MSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATR 80
M DL++L Q+R + ++ + A +
Sbjct: 336 MKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEK 370
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 30.7 bits (66), Expect = 5.0
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Frame = -3
Query: 529 EDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPIL-LKLCDMNLRSKVWAA 353
EDTL ++E + +F +N+ + + E S I LK+ D + R K+
Sbjct: 162 EDTLQWLIEFVELPQYEKNFRDNNVKGT-TLPRIAVHEPSFMISQLKISDRSHRQKL--- 217
Query: 352 KTSLKGSGITLSEFLTKRRH----DIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEV 185
LK + L LT+ H D ++ GV CW Y Q H ++
Sbjct: 218 --QLKALDVVLFGPLTRPPHNWMKDFILTVSIVIGVGGCWF----AYTQNKTSKEHVAKM 271
Query: 184 MSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATR 80
M DL++L Q+R + ++ + A +
Sbjct: 272 MKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEK 306
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 30.7 bits (66), Expect = 5.0
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Frame = -3
Query: 529 EDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPIL-LKLCDMNLRSKVWAA 353
EDTL ++E + +F +N+ + + E S I LK+ D + R K+
Sbjct: 139 EDTLQWLIEFVELPQYEKNFRDNNVKGT-TLPRIAVHEPSFMISQLKISDRSHRQKL--- 194
Query: 352 KTSLKGSGITLSEFLTKRRH----DIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEV 185
LK + L LT+ H D ++ GV CW Y Q H ++
Sbjct: 195 --QLKALDVVLFGPLTRPPHNWMKDFILTVSIVIGVGGCWF----AYTQNKTSKEHVAKM 248
Query: 184 MSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATR 80
M DL++L Q+R + ++ + A +
Sbjct: 249 MKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEK 283
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 5.0
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Frame = -3
Query: 529 EDTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPIL-LKLCDMNLRSKVWAA 353
EDTL ++E + +F +N+ + + E S I LK+ D + R K+
Sbjct: 211 EDTLQWLIEFVELPQYEKNFRDNNVKGT-TLPRIAVHEPSFMISQLKISDRSHRQKL--- 266
Query: 352 KTSLKGSGITLSEFLTKRRH----DIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEV 185
LK + L LT+ H D ++ GV CW Y Q H ++
Sbjct: 267 --QLKALDVVLFGPLTRPPHNWMKDFILTVSIVIGVGGCWF----AYTQNKTSKEHVAKM 320
Query: 184 MSDLDALAKTTMPEDAAQKRAQTGKDTKESAAATR 80
M DL++L Q+R + ++ + A +
Sbjct: 321 MKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEK 355
>AB075859-1|BAB85565.1| 309|Homo sapiens KIAA1979 protein protein.
Length = 309
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 469 NTSNIS-RCHRMGKTFTPERSRPILLKLCDMNLRSKVWAAK 350
+T N S +C+ GKTF+ E + I+ + + NLRS + AK
Sbjct: 149 HTGNKSYKCNECGKTFSKELTHAIIDVILERNLRSAMSVAK 189
>BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin
precursor protein.
Length = 1429
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin
precursor protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein.
Length = 1272
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 170 CSCQDDYAGRCCS-KEGTNRQG--HKGVCSCDQTKTCGC 63
C C +++ G C T+ G H+G+C+ + C C
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSC 309
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = -2
Query: 212 GWGATSCRSDV*SGCSCQDDYAGRCCSKEGTNRQGHKGVC---SCDQTKTC 69
G G++ C+S C CQ CC G + C C Q+ C
Sbjct: 106 GCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQSSCC 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,048,244
Number of Sequences: 237096
Number of extensions: 2198152
Number of successful extensions: 5564
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5556
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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