Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0087
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 6.3
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 6.3
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 6.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 8.3
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 8.3
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 8.3
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 8.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 522 RDCIYRRVSLHKNWLPRPWCYFQPSPWLP-QRCP 424
R + R + H W PR Y + + P +RCP
Sbjct: 1669 RGTVIRSIRSHSTWDPRRHMYEELNHCAPNRRCP 1702
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 598 TSMKLANDLVTDASRVLPFVSRITITRLYLSSCF 497
T++ L++ + LP +S + +YL +CF
Sbjct: 258 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCF 291
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 598 TSMKLANDLVTDASRVLPFVSRITITRLYLSSCF 497
T++ L++ + LP +S + +YL +CF
Sbjct: 258 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCF 291
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 598 TSMKLANDLVTDASRVLPFVSRITITRLYLSSCF 497
T++ L++ + LP +S + +YL +CF
Sbjct: 197 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCF 230
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -1
Query: 686 LILFLLLG*EAVVQLGDLIRYNVLNYSAVHVDEVGKRLGHGCLTSVAI 543
L+ LL+G ++ + + N+L A++ D +R+G+ L S+AI
Sbjct: 22 LLSVLLVGFLFLILIFLSVAGNILVCVAIYTDRGLRRIGNLFLASLAI 69
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 604 PFTSMKLANDLVTDASRVLPFVSRITI 524
PFT + V + S LPF+ R I
Sbjct: 295 PFTPFGPVTEKVNNDSNSLPFIDRTPI 321
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 604 PFTSMKLANDLVTDASRVLPFVSRITI 524
PFT + V + S LPF+ R I
Sbjct: 295 PFTPFGPVTEKVNNDSNSLPFIDRTPI 321
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 444 KEKVGNNTRVWEASS 488
+E+ G+N VWEA++
Sbjct: 24 EEETGSNLPVWEAAA 38
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 444 KEKVGNNTRVWEASS 488
+E+ G+N VWEA++
Sbjct: 24 EEETGSNLPVWEAAA 38
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 123 YNMSETAEAAKINKWDGAAAKNAVDDAIREVMTGDLK 233
+ + E +IN D +N D ++ ++TGD K
Sbjct: 119 HELKEKHLTQRINSCDLLKKRNENDPFLKRLITGDEK 155
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 444 KEKVGNNTRVWEASS 488
+E+ G+N VWEA++
Sbjct: 24 EEETGSNLPVWEAAA 38
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 172 PSHLLIFAASAVSDMLYILK 113
P+ ++ A S+VSD LY+L+
Sbjct: 406 PTSVIQAATSSVSDDLYLLE 425
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,352
Number of Sequences: 438
Number of extensions: 4301
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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