Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0083
         (415 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5601E Cluster: PREDICTED: similar to CG3662-PA,...    44   0.002
UniRef50_UPI0000DB797E Cluster: PREDICTED: similar to CG3662-PA,...    38   0.11 
UniRef50_Q7PVX7 Cluster: ENSANGP00000021507; n=3; Culicidae|Rep:...    37   0.14 
UniRef50_Q9VPT9 Cluster: CG3662-PA, isoform A; n=4; Sophophora|R...    35   0.76 
UniRef50_Q7UEY8 Cluster: Probable ferredoxin--NADP reductase; n=...    33   2.3  
UniRef50_Q1EUL5 Cluster: ABC transporter related; n=1; Clostridi...    33   3.1  
UniRef50_Q2HGP4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.1  
UniRef50_Q5Z0F7 Cluster: Putative dehydrogenase; n=2; Actinomyce...    31   9.3  
UniRef50_A7CVX4 Cluster: Putative uncharacterized protein; n=1; ...    31   9.3  
UniRef50_A7U552 Cluster: Mitochondrial malate-dehydrogenase; n=2...    31   9.3  
UniRef50_A7ANP7 Cluster: Putative uncharacterized protein; n=1; ...    31   9.3  

>UniRef50_UPI0000D5601E Cluster: PREDICTED: similar to CG3662-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG3662-PA, isoform A - Tribolium castaneum
          Length = 312

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
 Frame = +3

Query: 75  MTVFTKPSLNAHKPEAIADQLCEDELIDM---HNIEGP-----YIM---RKRSATMLVCM 221
           MT+ TKP ++  K + +A  +  D+L       ++EG      ++    R+ S    +C+
Sbjct: 1   MTILTKP-ISGEKKDKLAPLVQNDQLASAPPTEDVEGQPSDVVFLKARARRVSTATTLCL 59

Query: 222 FLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGYCTIPISTRDSQLM 362
            L +L+V +  I  G  LY QY+    +RR+ GY  IP+ + D + +
Sbjct: 60  ILTSLIVVSIGIFVGKSLYNQYIS-AQMRRFTGYAQIPMPSEDVETL 105


>UniRef50_UPI0000DB797E Cluster: PREDICTED: similar to CG3662-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG3662-PA, isoform A - Apis mellifera
          Length = 337

 Score = 37.5 bits (83), Expect = 0.11
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +3

Query: 165 NIEGPYIMRKRS-----ATMLVCMFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGYCT 329
           ++ G Y + KRS      T    +FL+AL++    + GG+ +YRQY R    +   G+ +
Sbjct: 42  DVGGHYFVSKRSIYRIHVTATFLLFLVALMILIIGVIGGLYIYRQYARTQMHKFKTGWYS 101

Query: 330 IP 335
           IP
Sbjct: 102 IP 103


>UniRef50_Q7PVX7 Cluster: ENSANGP00000021507; n=3; Culicidae|Rep:
           ENSANGP00000021507 - Anopheles gambiae str. PEST
          Length = 233

 Score = 37.1 bits (82), Expect = 0.14
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 219 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGYCTIPISTRDSQLMEPNFRTM 383
           + L+AL+  +    GG+  YRQY +     RY G+C IP    D+   E  +R+M
Sbjct: 2   LLLVALLGFSMGTIGGLFYYRQYAQARNHMRYHGFCKIPY---DASNFESLYRSM 53


>UniRef50_Q9VPT9 Cluster: CG3662-PA, isoform A; n=4; Sophophora|Rep:
           CG3662-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 319

 Score = 34.7 bits (76), Expect = 0.76
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 219 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGYCTIP 335
           +FL+A+VV    + GG  LYR Y    +  RY   C IP
Sbjct: 66  LFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIP 104


>UniRef50_Q7UEY8 Cluster: Probable ferredoxin--NADP reductase; n=1;
           Pirellula sp.|Rep: Probable ferredoxin--NADP reductase -
           Rhodopirellula baltica
          Length = 324

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +3

Query: 237 VVAATSIAGGVLLYRQYVRIGTVRRYQGYCTIPISTRDSQLMEPN 371
           VV ATS+     +  Q      +RR+  YC +P++TR+ + +EPN
Sbjct: 195 VVIATSVRYQSDIAYQSEHDELMRRFPNYCYLPLTTREPKNLEPN 239


>UniRef50_Q1EUL5 Cluster: ABC transporter related; n=1; Clostridium
           oremlandii OhILAs|Rep: ABC transporter related -
           Clostridium oremlandii OhILAs
          Length = 615

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 306 RRYQGYCTIPISTRDSQLMEPNFRTMPLRWSNEPD 410
           ++YQG  T+PI  RD    E  FR +  R+ N PD
Sbjct: 353 KKYQG--TLPIEKRDDNEYELEFRNVSFRYPNSPD 385


>UniRef50_Q2HGP4 Cluster: Putative uncharacterized protein; n=1;
            Chaetomium globosum|Rep: Putative uncharacterized protein
            - Chaetomium globosum (Soil fungus)
          Length = 1793

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +3

Query: 84   FTKPSLNAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLVCMFLMALVVAATSI 257
            F  PS+ A + +    Q+  + L ++H +  PY +R+  A +L  +  MA ++   S+
Sbjct: 1024 FINPSVRAERLDEQFAQITSENLPELHRLIRPYFLRRTKAEVLTFLPPMAQIILPVSM 1081


>UniRef50_Q5Z0F7 Cluster: Putative dehydrogenase; n=2;
           Actinomycetales|Rep: Putative dehydrogenase - Nocardia
           farcinica
          Length = 537

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 18/33 (54%), Positives = 20/33 (60%)
 Frame = +2

Query: 224 PHGVSGGRDQHCRWRALVPSVRENRHRTTIPGL 322
           P+G SG  DQ   WR L  SV   RHRT +PGL
Sbjct: 471 PYGGSGELDQSYLWRPL-GSV--GRHRTPVPGL 500


>UniRef50_A7CVX4 Cluster: Putative uncharacterized protein; n=1;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 517

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 222 FLMALVVAATSIAGGVLLYRQYVRIGTVRRY 314
           F+ A ++A  ++A   LLYRQ++R+G  R Y
Sbjct: 482 FVTACILALIALASSWLLYRQFMRLGGPRDY 512


>UniRef50_A7U552 Cluster: Mitochondrial malate-dehydrogenase; n=2;
           Toxoplasma gondii|Rep: Mitochondrial
           malate-dehydrogenase - Toxoplasma gondii
          Length = 470

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
 Frame = -2

Query: 324 SNPGIVVRCRFSR--TDGTRARHLQCWSRP----PLTP*GT 220
           S PG V R RF R  +  T ARHLQ  SRP    P+TP  T
Sbjct: 102 SRPGSVSRFRFHRPSSSATAARHLQGESRPFASCPVTPEAT 142


>UniRef50_A7ANP7 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 240

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 144 DELIDMHNIEGPYIMRKRSATMLVCMFLMALVVAATSIAGGVLLYRQY 287
           D+L+D+  ++  Y++   SAT ++ M    LV  ++ I  G LLY  +
Sbjct: 56  DKLVDIGPMDVLYVVLMNSATAMIGMCFTVLVHGSSVINNGALLYELF 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,286,005
Number of Sequences: 1657284
Number of extensions: 7894775
Number of successful extensions: 18064
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18060
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)