Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0083
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    25   1.4  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   2.5  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    22   7.7  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 158 YAQHRGPLHHEEAFRYYASVYVPHGVSGGRDQHC 259
           YA H  P H  E  +Y    + P  V+  RD +C
Sbjct: 404 YAMHHDPAHFPEPEQYRPERFSPDEVA-RRDPYC 436


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 304  YDDTRVTVPYPFLLGTRN*W 363
            YDD  +T+  P+++ TR  W
Sbjct: 950  YDDGGLTLLLPYIISTRRNW 969


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 158 YAQHRGPLHHEEAFRYYASVYVPHG 232
           YA H  P H+ E  R+    + P G
Sbjct: 396 YAIHYDPQHYPEPERFDPDRFTPEG 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,998
Number of Sequences: 2352
Number of extensions: 9060
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)