Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0081
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...   214   2e-57
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...   211   1e-56
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       78   3e-16
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       69   2e-13
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       57   6e-10
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   3.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.4  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   6.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   8.5  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.5  

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score =  214 bits (523), Expect = 2e-57
 Identities = 103/189 (54%), Positives = 132/189 (69%), Gaps = 4/189 (2%)
 Frame = +2

Query: 95  THSKVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDI 274
           T  KVLCYYD  + +RE   ++   D++ AL FCTHL+YGYAG+  +TY+L SLNE+LD+
Sbjct: 29  TGPKVLCYYDGSNALREGLGKVTVSDIELALPFCTHLMYGYAGVNAETYRLRSLNEDLDL 88

Query: 275 DRTHDNYRAITSLKAKYPGLTVLLSVGG--DADTEEP-EKYNLLLESQQARTVFINSGVL 445
           D    ++RA+T+LK +YPGL V LSVG   D   E+P EKY  LLES  +RT F+NS   
Sbjct: 89  DSGKSHFRAVTTLKRRYPGLKVFLSVGNYRDLGEEKPFEKYLTLLESGGSRTAFVNSAYS 148

Query: 446 LAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKKTF-GTTPVDEKESEHREGFTALV 622
           L + Y FDG+DLAWQFP+ KPK+IR   G +WHG KK F G + +D K  EHRE FTALV
Sbjct: 149 LLKTYEFDGLDLAWQFPQTKPKRIRGWTGKVWHGFKKLFTGDSVLDPKADEHREEFTALV 208

Query: 623 RELKQALIH 649
           R+LK A +H
Sbjct: 209 RDLKNAFVH 217


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score =  211 bits (516), Expect = 1e-56
 Identities = 103/181 (56%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
 Frame = +2

Query: 101 SKVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDR 280
           SKVLCYYD+ +++ E   ++   D+D AL FCTHL+YGYAGI  +T K VS   NLD+D 
Sbjct: 26  SKVLCYYDAANFLIEGLGKVSLADIDAALPFCTHLVYGYAGIDVETNKAVSRQPNLDLDT 85

Query: 281 THDNYRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTVFINSGVLLAEQY 460
              NYR +T LK+KYP L VLL +GG   +E   KY  LLES  AR  FINS   L + Y
Sbjct: 86  GKGNYRTVTQLKSKYPSLKVLLGLGGYKFSEPSIKYLTLLESGAARITFINSVYSLLKTY 145

Query: 461 GFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKKTF-GTTPVDEKESEHREGFTALVRELKQ 637
           GFDG+DL WQFP  KPKK+RST G +WHG KK F G + +DEK  EHRE FTAL+RELK 
Sbjct: 146 GFDGVDLEWQFPMNKPKKVRSTLGGVWHGFKKVFSGDSVLDEKAEEHREEFTALLRELKN 205

Query: 638 A 640
           A
Sbjct: 206 A 206


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 77.8 bits (183), Expect = 3e-16
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 104 KVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPD-TYKLVSLNENLDIDR 280
           KV+CY  + +  R    R     +DP+L  CTHL+YG+ GI  D T +++    +L+ + 
Sbjct: 32  KVVCYVGTWAVYRPGNGRYDIEHIDPSL--CTHLMYGFFGINEDATVRIIDPYLDLEENW 89

Query: 281 THDNYRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTVFINSGVLLAEQY 460
              + +    LK   PGL  L ++GG    E   K++ +  S + R  FI+  V   +++
Sbjct: 90  GRGHIKRFVGLKNVGPGLKTLAAIGGW--NEGSRKFSAMAASGELRKRFISDCVAFCQRH 147

Query: 461 GFDGIDLAWQFP 496
           GFDGIDL W++P
Sbjct: 148 GFDGIDLDWEYP 159


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 68.5 bits (160), Expect = 2e-13
 Identities = 40/119 (33%), Positives = 65/119 (54%)
 Frame = +2

Query: 131 SYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITS 310
           ++ R+   + LP D+D  L  CTH++YG+A +  +   +   +   DID     Y  +  
Sbjct: 2   AWYRQGNGKYLPEDIDSDL--CTHVVYGFAVLDREALTIKPHDSWADIDNRF--YERVVE 57

Query: 311 LKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTVFINSGVLLAEQYGFDGIDLAW 487
           LK K  G  V +++GG  D+   +KY+ L+ S QAR  FI + +   ++Y FDG+DL W
Sbjct: 58  LKKK--GKKVTVAIGGWNDSAG-DKYSRLVRSSQARKRFIENVMKFIDKYNFDGLDLDW 113


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 56.8 bits (131), Expect = 6e-10
 Identities = 33/98 (33%), Positives = 54/98 (55%)
 Frame = +2

Query: 194 CTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTE 373
           CTH++YG+A +   T  + + +   DID     Y  + + K K  G+ V L++GG  D+ 
Sbjct: 21  CTHIVYGFAVLDYSTLTIKTHDSWADIDNKF--YTRVVAAKEK--GVKVTLAIGGWNDSA 76

Query: 374 EPEKYNLLLESQQARTVFINSGVLLAEQYGFDGIDLAW 487
             +KY+ L+ +  AR  F+   +   E+YGFDG+D  W
Sbjct: 77  G-DKYSRLVRTS-ARAKFVEHVIGFLEKYGFDGLDFDW 112


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = -3

Query: 239 RCQAGYRHSRTASGCRTTERDRGPTAACGLEIL*HSSCCRSNKVLCCG 96
           RC         AS CR+T   +     CGL      SC    K   CG
Sbjct: 507 RCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCALCG 554


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = +2

Query: 353 GGDADTEEPEKYNLLLESQQART 421
           GG++D+ + E+ NL+ E++ AR+
Sbjct: 106 GGESDSNDDEEDNLIDENRYARS 128


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = -2

Query: 489 CQARSIPSKPY------CSANSTPELMKT---VRACCDSSRRLYFSGSSVSASPPTDNNT 337
           C  +S PS P+         ++T   M T   V AC  ++     SG+S ++SP  D  +
Sbjct: 7   CSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMS 66

Query: 336 V 334
           V
Sbjct: 67  V 67


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = -2

Query: 489 CQARSIPSKPY------CSANSTPELMKT---VRACCDSSRRLYFSGSSVSASPPTDNNT 337
           C  +S PS P+         ++T   M T   V AC  ++     SG+S ++SP  D  +
Sbjct: 7   CSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMS 66

Query: 336 V 334
           V
Sbjct: 67  V 67


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 630 NSRTRAVKPSRCSDSFSSTGVVPNVFLIPCQSDPQVERIF 511
           +SRT  +KPS     F S  V+    L  C +D  +  +F
Sbjct: 237 SSRTDGLKPSIAHRDFKSKNVLLKADLTACIADFGLALVF 276


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 323 TWLSSW*SHGSCRV 282
           +WLSS+ S+ SCRV
Sbjct: 643 SWLSSYLSNRSCRV 656


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +3

Query: 117 TTTAGAMSENLKPACCRWTSIPLCRSAPTCCTAMPVSSLTPISWC 251
           T   G MSE+  P         L R +P+     PV    P  WC
Sbjct: 270 TPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTFWC 314


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 498 ELSLRRSARPGDRFGMELRRHSAPRQSMRRNLSTVKVSL 614
           ELS  ++ R        +R HS P+ + RR L+ V  S+
Sbjct: 755 ELSTAKALRVVGVVTAVMRNHSGPQVAKRRLLAAVAESI 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,950
Number of Sequences: 2352
Number of extensions: 14146
Number of successful extensions: 51
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)