Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0078
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   5.6  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   5.6  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   9.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.8  

>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 180 FLVHTPNRTYYLEDPDSYALEWERVIDEVRIETYGRD 290
           +LVH    T  L++      +W +V+D+ + +T   D
Sbjct: 254 YLVH--QHTQNLDETFDMMYQWRKVVDDFKQQTQSED 288


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 126 GEIPWSPELRVEAKNFRI 179
           GE PW   LR +A+N +I
Sbjct: 110 GEFPWMALLRFQARNRKI 127


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 249 VPIPMRKNLDLLGNMYDSA 193
           VP+  +K +D+LGN+ +++
Sbjct: 334 VPLDPKKGIDILGNIMENS 352


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 306  ALPQTRAEPATLPRPSGPAFYHSTPLVECAH-IGNCSLG 419
            ++P      A L  P  P    +  L+ECAH +  C+ G
Sbjct: 1094 SVPDPALITALLDLPQAPIVARAAFLIECAHFVHLCNRG 1132


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 653  LNVNRNQSINIHSDSSLEHVVASLNRIRCTKRAARASHLAL 531
            L V RN +  +  + + E    SLN + C  +   A+ LAL
Sbjct: 928  LTVRRNLATVLSGNLNEETEYVSLNELPCNIKCEGANFLAL 968


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 292 RLKCRRCRRPEQSLRRC 342
           ++ C RCR+P    R C
Sbjct: 201 KITCHRCRKPGHMKRDC 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,745
Number of Sequences: 2352
Number of extensions: 17720
Number of successful extensions: 78
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)