Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0078
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF130407-1|AAD42308.1| 632|Caenorhabditis elegans phophoinositi... 115 3e-26
AF130406-1|AAD42307.1| 636|Caenorhabditis elegans phophoinositi... 115 3e-26
AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class pro... 115 3e-26
AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class pro... 115 3e-26
U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical pr... 35 0.052
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 29 2.6
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 29 2.6
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 29 2.6
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 29 2.6
AC024759-7|AAP13762.1| 483|Caenorhabditis elegans Hypothetical ... 29 3.4
>AF130407-1|AAD42308.1| 632|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1b protein.
Length = 632
Score = 115 bits (277), Expect = 3e-26
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +3
Query: 6 LILKQGLVDKRKGLFPRRRMLLLTTGPRLFYVDPANMILKGEIPWSPELRVEAKNFRIFL 185
LILKQG ++K++GLF RRRM LLT GP L Y+D N++LKGE+PW+P ++VE KN F
Sbjct: 475 LILKQGYLEKKRGLFARRRMFLLTEGPHLLYIDVPNLVLKGEVPWTPCMQVELKNSGTFF 534
Query: 186 VHTPNRTYYLEDPDSYALEWERVIDEVR 269
+HTPNR YYL D + A EW + I++VR
Sbjct: 535 IHTPNRVYYLFDLEKKADEWCKAINDVR 562
>AF130406-1|AAD42307.1| 636|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1a protein.
Length = 636
Score = 115 bits (277), Expect = 3e-26
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +3
Query: 6 LILKQGLVDKRKGLFPRRRMLLLTTGPRLFYVDPANMILKGEIPWSPELRVEAKNFRIFL 185
LILKQG ++K++GLF RRRM LLT GP L Y+D N++LKGE+PW+P ++VE KN F
Sbjct: 479 LILKQGYLEKKRGLFARRRMFLLTEGPHLLYIDVPNLVLKGEVPWTPCMQVELKNSGTFF 538
Query: 186 VHTPNRTYYLEDPDSYALEWERVIDEVR 269
+HTPNR YYL D + A EW + I++VR
Sbjct: 539 IHTPNRVYYLFDLEKKADEWCKAINDVR 566
>AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform a protein.
Length = 632
Score = 115 bits (277), Expect = 3e-26
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +3
Query: 6 LILKQGLVDKRKGLFPRRRMLLLTTGPRLFYVDPANMILKGEIPWSPELRVEAKNFRIFL 185
LILKQG ++K++GLF RRRM LLT GP L Y+D N++LKGE+PW+P ++VE KN F
Sbjct: 475 LILKQGYLEKKRGLFARRRMFLLTEGPHLLYIDVPNLVLKGEVPWTPCMQVELKNSGTFF 534
Query: 186 VHTPNRTYYLEDPDSYALEWERVIDEVR 269
+HTPNR YYL D + A EW + I++VR
Sbjct: 535 IHTPNRVYYLFDLEKKADEWCKAINDVR 562
>AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform b protein.
Length = 636
Score = 115 bits (277), Expect = 3e-26
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +3
Query: 6 LILKQGLVDKRKGLFPRRRMLLLTTGPRLFYVDPANMILKGEIPWSPELRVEAKNFRIFL 185
LILKQG ++K++GLF RRRM LLT GP L Y+D N++LKGE+PW+P ++VE KN F
Sbjct: 479 LILKQGYLEKKRGLFARRRMFLLTEGPHLLYIDVPNLVLKGEVPWTPCMQVELKNSGTFF 538
Query: 186 VHTPNRTYYLEDPDSYALEWERVIDEVR 269
+HTPNR YYL D + A EW + I++VR
Sbjct: 539 IHTPNRVYYLFDLEKKADEWCKAINDVR 566
>U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical
protein F10C5.2 protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 186 VHTPNRTYY-LEDPDSYALEWERVIDEVRIETYGRDTT*MPALPQT 320
+ TPN +++ LED + A EW+ V+ R YGRD+ +P++
Sbjct: 404 LRTPNESHFDLEDDEDGAEEWDEVVVRRRASEYGRDSVQSVRVPRS 449
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 2.6
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +3
Query: 48 FPRRRMLLLTTGPRLFYVDPANMILKGEIPWSPELRVEAKNFRIFLVHTPNR----TYYL 215
+PR++ + GP Y PA P +PE VE KN R+ + P R +
Sbjct: 40 YPRQQPQGIPQGPPPAYAPPA-------APKAPEKVVEPKNRRVTIAEPPERVAEPSPTP 92
Query: 216 EDPDSYALEWERVIDEVRIETYGRDTT*MPALPQTRAEPATLPR--PSGPA 362
EDP+ + ++ EV E R + +P P P+ P+ PA
Sbjct: 93 EDPELFTC-IDQTEKEVEKEVEKRKSAPRAPVPAPTPAPQAAPQATPAAPA 142
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 333 ATLPRPSGPAFYHSTPLV-ECAHIGNCSLGFEHGQHPIIICSVSTTS 470
+TLP P YH TP + H N LG+++G H I + + +S
Sbjct: 70 STLPPPPPALSYHQTPQQPQLLHHHNNHLGYQNGIHQITSINSAASS 116
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 333 ATLPRPSGPAFYHSTPLV-ECAHIGNCSLGFEHGQHPIIICSVSTTS 470
+TLP P YH TP + H N LG+++G H I + + +S
Sbjct: 87 STLPPPPPALSYHQTPQQPQLLHHHNNHLGYQNGIHQITSINSAASS 133
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 333 ATLPRPSGPAFYHSTPLV-ECAHIGNCSLGFEHGQHPIIICSVSTTS 470
+TLP P YH TP + H N LG+++G H I + + +S
Sbjct: 199 STLPPPPPALSYHQTPQQPQLLHHHNNHLGYQNGIHQITSINSAASS 245
>AC024759-7|AAP13762.1| 483|Caenorhabditis elegans Hypothetical
protein Y37E11AR.7 protein.
Length = 483
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 76 VRSSIRRLGNRPFRLSTRPCF 14
+R+ ++R+GN L TRPCF
Sbjct: 294 LRTKLKRIGNHQIFLETRPCF 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,270
Number of Sequences: 27780
Number of extensions: 361800
Number of successful extensions: 938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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