Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0075
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY825714-1|AAV70277.1|  156|Anopheles gambiae subtilase serine p...    29   0.054
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            27   0.16 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   0.50 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   0.87 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   1.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   3.5  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   8.1  

>AY825714-1|AAV70277.1|  156|Anopheles gambiae subtilase serine
           protease protein.
          Length = 156

 Score = 29.1 bits (62), Expect = 0.054
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 255 VTVGTAAEAIASDSIATGQTAKTSTG-ATRDSEVTGAGS-GTATESLSITAGRTSGA 91
           +T G  A+  +S + AT   A   T  AT  + V  AGS GT    ++ T G T+G+
Sbjct: 19  LTEGPPAKKTSSTANATTGAANAVTNNATNGNSVANAGSNGTGNNVITATNGATNGS 75


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 195 AKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
           AKT TGAT  S +  +G  T + + S T+  T
Sbjct: 88  AKTGTGATPTSSIASSGDDTNSSNNSTTSNGT 119


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 186 STGATRDSEVTGAGSGTATESLSITAGRTSG 94
           + G T  S  +G G GTA  S    A  T+G
Sbjct: 354 AAGTTNSSANSGTGGGTAAPSSGSNANSTAG 384


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 267 GGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVT 154
           GG+  + GTA +   S  ++TG+  +    A  D+E T
Sbjct: 49  GGVK-SAGTATKLATSTPVSTGEVRRMLADAKADNETT 85


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 309 FCTVSVSVGVLSEDGGLSVT 250
           FC +  SV ++S DGG+S T
Sbjct: 814 FCYIDRSVCIVSPDGGVSWT 833


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = -1

Query: 285 GVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAG 106
           G  +  GG  +T G  ++ I +     G   + S+G        G GSG  +   S T  
Sbjct: 819 GAGASGGGFLIT-GDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGSSTTR 877

Query: 105 R 103
           R
Sbjct: 878 R 878


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 288 VGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTST 181
           + ++ E+       GTA E  A+++++  QTA   T
Sbjct: 609 ISIIDEEEEREDIEGTADEDTAANTLSNAQTATAFT 644


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,818
Number of Sequences: 2352
Number of extensions: 4418
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)