Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0075
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 33 0.061
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 31 0.19
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 0.75
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 0.75
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 0.75
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 29 0.75
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 29 0.75
Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z81093-3|CAB03147.1| 610|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z82056-2|CAB04855.1| 102|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 1.7
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 1.7
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 1.7
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF099925-17|AAO38624.1| 462|Caenorhabditis elegans Calcium bind... 28 2.3
AF099925-16|AAC69511.1| 482|Caenorhabditis elegans Calcium bind... 28 2.3
AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium bind... 28 2.3
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 28 2.3
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 28 2.3
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 4.0
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 27 5.3
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 27 5.3
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 26 7.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 26 7.0
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 26 7.0
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 26 7.0
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 26 7.0
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 26 7.0
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical pr... 26 9.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 26 9.3
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 33.1 bits (72), Expect = 0.061
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1
Query: 303 TVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATES 124
TVS S + GG S ++G+ +++S +G T STG+T +S AG+G+ S
Sbjct: 1173 TVSASTES-TVSGGSSASIGSTNTPDSTESTISGSTISGSTGST-ESSTMSAGTGSTETS 1230
Query: 123 LS 118
S
Sbjct: 1231 TS 1232
Score = 30.3 bits (65), Expect = 0.43
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Frame = -1
Query: 303 TVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTA----KTSTGATRDSEVTG---AG 145
TVSVS G DG + + + +++S +G ++ T+T + +S ++G +G
Sbjct: 1151 TVSVSTGSTITDGSTASRSSVSTVSASTESTVSGGSSASIGSTNTPDSTESTISGSTISG 1210
Query: 144 SGTATESLSITAGRTS 97
S +TES +++AG S
Sbjct: 1211 STGSTESSTMSAGTGS 1226
Score = 29.9 bits (64), Expect = 0.57
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = -1
Query: 297 SVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLS 118
+VS S G S ++ ++S+S + T T+TG +S V G+ TAT S +
Sbjct: 859 TVSQSTSSSTTGQSTVSESSVSTVSSESTISQSTGSTTTG---ESTVFGSTGSTATGSST 915
Query: 117 ITAGRTS 97
++A S
Sbjct: 916 MSASTGS 922
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -1
Query: 291 SVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSIT 112
SV +S + +S + G+ +S G T T+TG++ S TG+ + +IT
Sbjct: 878 SVSTVSSESTISQSTGSTT---TGESTVFGSTGSTATGSSTMSASTGSTDTPGSTESTIT 934
Query: 111 AGRTSGAFVVA 79
+G V+
Sbjct: 935 GSTVTGESTVS 945
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 303 TVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATES 124
TVS S +S+ G + G+ + S++T + STG + S TG+ + +
Sbjct: 702 TVSDS-STISDSTGSTNAPGSTESTVTGSSVSTVSGSTGSTGPSTMSASTGSTNTPGSTE 760
Query: 123 LSITAGRT 100
+IT G T
Sbjct: 761 STITDGST 768
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 297 SVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLS 118
S G S + + + +S +G T T +G+T S +TG + + + +
Sbjct: 1045 STEAGSTVSGSSASTVTSSTGSSTSGESTVSGSTVSTVSGST-GSTITGESTVSGSTEST 1103
Query: 117 ITAGRT-SGAFV 85
+TA T SG+ V
Sbjct: 1104 VTAESTVSGSSV 1115
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 300 VSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESL 121
++VS G S G TV A+ S +TG + +TST + S V+ + S + T
Sbjct: 817 MTVSTGSTSSPGSTESTVSGASTM----SPSTGSSVETSTSGSSVSTVSQSTSSSTTGQS 872
Query: 120 SITAGRTS 97
+++ S
Sbjct: 873 TVSESSVS 880
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 258 SVTVGTAAEAIASD--SIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGA 91
S T G A+ + S TG+ + T+TG S TG S T T + A TS A
Sbjct: 519 STTTGEASSTTTGEASSTTTGEASSTTTGEA-SSTTTGEASSTTTGEATSVAATTSSA 575
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -1
Query: 258 SVTVGTAAEAIASD--SIATGQTAKTSTGATRDSEVTGAGSGTAT-ESLSITAGRTS 97
S T G A+ + S TG+ + T+TG S TG S T T E+ S T G S
Sbjct: 503 STTTGEASSTTTGEASSTTTGEASSTTTGEA-SSTTTGEASSTTTGEASSTTTGEAS 558
Score = 29.9 bits (64), Expect = 0.57
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 258 SVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTAT-ESLSITAGRTS 97
+ T E +AS + TG+ + T+TG S TG S T T E+ S T G S
Sbjct: 491 TTAAATTTEPLASTT--TGEASSTTTGEA-SSTTTGEASSTTTGEASSTTTGEAS 542
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 0.75
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -1
Query: 252 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGS--GTATESLSITAGRT 100
TVG+ + A +S S AT T STG+T + V G+ S G++T S S ++ T
Sbjct: 89 TVGSTSGAASSSSYATVSTIAGSTGST-ITPVPGSSSTIGSSTPSASSSSSGT 140
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 303 TVSVSVG-VLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATE 127
T++ S G ++ G S T+G++ + +S S T T STG+T V S T
Sbjct: 107 TIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGST--VTVVPGSSSTFAS 164
Query: 126 SLSITAGRTSGAFV 85
S I + + G+ V
Sbjct: 165 STPIASSSSPGSTV 178
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 0.75
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -1
Query: 252 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGS--GTATESLSITAGRT 100
TVG+ + A +S S AT T STG+T + V G+ S G++T S S ++ T
Sbjct: 296 TVGSTSGAASSSSYATVSTIAGSTGST-ITPVPGSSSTIGSSTPSASSSSSGT 347
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 303 TVSVSVG-VLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATE 127
T++ S G ++ G S T+G++ + +S S T T STG+T V S T
Sbjct: 314 TIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGST--VTVVPGSSSTFAS 371
Query: 126 SLSITAGRTSGAFV 85
S I + + G+ V
Sbjct: 372 STPIASSSSPGSTV 385
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 0.75
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -1
Query: 252 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGS--GTATESLSITAGRT 100
TVG+ + A +S S AT T STG+T + V G+ S G++T S S ++ T
Sbjct: 296 TVGSTSGAASSSSYATVSTIAGSTGST-ITPVPGSSSTIGSSTPSASSSSSGT 347
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 303 TVSVSVG-VLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATE 127
T++ S G ++ G S T+G++ + +S S T T STG+T V S T
Sbjct: 314 TIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGST--VTVVPGSSSTFAS 371
Query: 126 SLSITAGRTSGAFV 85
S I + + G+ V
Sbjct: 372 STPIASSSSPGSTV 385
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 240 AAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAEICD 67
++EA S+ +AT +A+ A RD+ A + TA + + TAG T A ++ D
Sbjct: 168 SSEASTSNGVATSSSARRPATAKRDT--LAAPTSTAAAAAAATAGGTPAAGAEEQLPD 223
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 240 AAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAEICD 67
++EA S+ +AT +A+ A RD+ A + TA + + TAG T A ++ D
Sbjct: 168 SSEASTSNGVATSSSARRPATAKRDT--LAAPTSTAAAAAAATAGGTPAAGAEEQLPD 223
>Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical
protein ZK673.1 protein.
Length = 154
Score = 29.1 bits (62), Expect = 1.00
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 258 SVTVGTAAEAIASD-SIATGQTAKTSTGATRDSEVTGAGSGTATES 124
S TV T A A+ + ATG T T+TG T S T A SG T S
Sbjct: 22 STTVDTTAATTATGGTTATGGT--TATGGTTVSGATTAASGATTAS 65
>Z81093-3|CAB03147.1| 610|Caenorhabditis elegans Hypothetical
protein F58D2.2 protein.
Length = 610
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 249 VGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAG 106
VG A A +I+ G+T T+ G+T S TG T T + T G
Sbjct: 562 VGFGATTTAMQTISPGKTGATTLGST--SSTTGITETTGTTGSTATTG 607
>Z82056-2|CAB04855.1| 102|Caenorhabditis elegans Hypothetical
protein T26H5.4 protein.
Length = 102
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = -1
Query: 270 DGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSIT 112
DG T A+ S S A +T +S +T G GSG A+ T
Sbjct: 14 DGSSDTTTSDMTSAMLSGSGAAAETEMSSDNSTSTGGAGGGGSGEASSKTFTT 66
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 303 TVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAG-SGTATE 127
TV+ V G + GT+ S+S+ G A T +G+T S TG G SGT +
Sbjct: 866 TVNGGAPVPPAPGSGATGSGTSGSG-TSESVTNGSGA-TESGST-GSGTTGTGTSGTGSS 922
Query: 126 SLSITAGRTS 97
+A RTS
Sbjct: 923 GTGASAARTS 932
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 303 TVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAG-SGTATE 127
TV+ V G + GT+ S+S+ G A T +G+T S TG G SGT +
Sbjct: 866 TVNGGAPVPPAPGSGATGSGTSGSG-TSESVTNGSGA-TESGST-GSGTTGTGTSGTGSS 922
Query: 126 SLSITAGRTS 97
+A RTS
Sbjct: 923 GTGASAARTS 932
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 261 LSVTVGTAAEAIASDSIA--TGQTAKTSTGATRDSEV--TGAGSGTATESLSITAGRTSG 94
L+ T+ A+ ++ + A TG T ++TG+T S+V + A G++T + T T
Sbjct: 435 LTSTIAPTADVTSATNAAGSTGATGSSATGSTVTSDVASSSATGGSSTNATDTTQSSTDA 494
Query: 93 AFV 85
+ V
Sbjct: 495 STV 497
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 261 LSVTVGTAAEAIASDSIA--TGQTAKTSTGATRDSEV--TGAGSGTATESLSITAGRTSG 94
L+ T+ A+ ++ + A TG T ++TG+T S+V + A G++T + T T
Sbjct: 438 LTSTIAPTADVTSATNAAGSTGATGSSATGSTVTSDVASSSATGGSSTNATDTTQSSTDA 497
Query: 93 AFV 85
+ V
Sbjct: 498 STV 500
>AF099925-17|AAO38624.1| 462|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform c protein.
Length = 462
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 89 NAPEVLPAVIDSDSVA-VPEPAPVTSESLVAPVEVLA 196
N ++P V DS S VPEP+P E+ V P V++
Sbjct: 17 NGLPIVPVVEDSISPEEVPEPSPEIEENTVPPPRVIS 53
>AF099925-16|AAC69511.1| 482|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform b protein.
Length = 482
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 89 NAPEVLPAVIDSDSVA-VPEPAPVTSESLVAPVEVLA 196
N ++P V DS S VPEP+P E+ V P V++
Sbjct: 17 NGLPIVPVVEDSISPEEVPEPSPEIEENTVPPPRVIS 53
>AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform a protein.
Length = 585
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 89 NAPEVLPAVIDSDSVA-VPEPAPVTSESLVAPVEVLA 196
N ++P V DS S VPEP+P E+ V P V++
Sbjct: 17 NGLPIVPVVEDSISPEEVPEPSPEIEENTVPPPRVIS 53
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 89 NAPEVLPAVIDSDSVA-VPEPAPVTSESLVAPVEVLA 196
N ++P V DS S VPEP+P E+ V P V++
Sbjct: 17 NGLPIVPVVEDSISPEEVPEPSPEIEENTVPPPRVIS 53
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 80 ATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLAV 199
ATT+ PE D + +P PA VT+E+ + E A+
Sbjct: 281 ATTDPPEATAPATDPPTTMIP-PAVVTTEANIITTEATAI 319
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 258 SVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATES 124
S T+G+ A + + A+ + +STGAT G+ + +T+S
Sbjct: 744 SSTMGSTAGSSSPQPTASSTSVPSSTGATSSGSTVGSSTMGSTQS 788
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 264 GLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGA 91
G S T A+ S +GQTA T+ G++ + GS +T + + TSG+
Sbjct: 816 GASSTEPIASSTANPGSSTSGQTAVTTQGSSSTQTNSNTGSTGSTVTNPPVSSSTSGS 873
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 101 VLPAVIDSDSVAVPEPAPVTSE 166
VLP V+ + + VP PAPV E
Sbjct: 782 VLPPVVPAPAPVVPAPAPVVKE 803
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = -1
Query: 246 GTAAEAIASDSIATGQTAKTSTGATRD---SEVTGAGSGTAT---ESLSITAGRTS 97
GT+ ++SDS GQ++ + A+ + + T GT+T S S TAG +S
Sbjct: 1319 GTSTMTVSSDSTTAGQSSTATNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSS 1374
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 246 GTAAEAIASDSIATGQTAKTSTGATRD---SEVTGAGSGTAT---ESLSITAGRTSGA 91
GT+ ++SDS G ++ + A+ + + T GT+T S S TAG++S A
Sbjct: 1281 GTSTMTVSSDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTAGQSSTA 1338
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 246 GTAAEAIASDSIATGQTAKTSTGATRD---SEVTGAGSGTAT---ESLSITAGRTSGA 91
GT+ ++SDS G ++ + A+ + + T GT+T S S TAG++S A
Sbjct: 1357 GTSTMTVSSDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTAGQSSTA 1414
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 80 ATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAP 181
A AP A ++ VAVP PAP + + AP
Sbjct: 495 APAAAPAPADAPVEQAPVAVPAPAPAAAPAPAAP 528
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 243 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGT 136
TAA T +A T+ T+DSE T S T
Sbjct: 166 TAASTTKDSETTTEASATTAASTTKDSETTTEASAT 201
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 243 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGT 136
TAA T +A T+ T+DSE T S T
Sbjct: 166 TAASTTKDSETTTEASATTAASTTKDSETTTEASAT 201
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 243 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGT 136
TAA T +A T+ T+DSE T S T
Sbjct: 166 TAASTTKDSETTTEASATTAASTTKDSETTTEASAT 201
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 243 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGT 136
TAA T +A T+ T+DSE T S T
Sbjct: 166 TAASTTKDSETTTEASATTAASTTKDSETTTEASAT 201
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 279 LSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRT 100
++E G T A EA +S+ T + S T S VT GSG T + ++ G
Sbjct: 2829 VTEASGEETTTAAATEA-SSEETTTSAVTEGSGEETTTSAVT-EGSGEETTTSAVPEGEN 2886
Query: 99 S 97
S
Sbjct: 2887 S 2887
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 258 SVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTS 97
+ T T + ++ + +T + TST +T S + + + + + S I A RTS
Sbjct: 520 TTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVRTS 573
>Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical
protein F54C8.6 protein.
Length = 265
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 107 PAVIDSDSVAVPEPAPVTSESLVAPVEVLA 196
P V++ + +PEP P S S+V +E+LA
Sbjct: 13 PKVVEIPTNGLPEPTP--SSSVVQEIEILA 40
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 258 SVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGT 136
S T+G+ A + + + + +STGAT T GS T
Sbjct: 1496 SSTMGSTAGSSSPQPTVSSTSVPSSTGATSSGSSTTVGSST 1536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,602,269
Number of Sequences: 27780
Number of extensions: 96285
Number of successful extensions: 507
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -