Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0070
(577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6ZYL4 Cluster: TFIIH basal transcription factor comple... 102 7e-21
UniRef50_Q7Q3F7 Cluster: ENSANGP00000018539; n=5; Endopterygota|... 90 3e-17
UniRef50_Q9N390 Cluster: Putative uncharacterized protein; n=2; ... 80 3e-14
UniRef50_Q9LNA6 Cluster: F5O11.12; n=2; Arabidopsis thaliana|Rep... 62 1e-08
UniRef50_Q0DK33 Cluster: Os05g0198700 protein; n=2; Oryza sativa... 61 2e-08
UniRef50_Q55CT8 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q4P985 Cluster: RNA polymerase II transcription factor ... 54 2e-06
UniRef50_Q55Z69 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_O43257 Cluster: Zinc finger HIT domain-containing prote... 50 3e-05
UniRef50_Q8X0V0 Cluster: RNA polymerase II transcription factor ... 50 3e-05
UniRef50_UPI0000E48363 Cluster: PREDICTED: hypothetical protein;... 50 5e-05
UniRef50_Q6C1B5 Cluster: RNA polymerase II transcription factor ... 48 2e-04
UniRef50_UPI000023CDDE Cluster: hypothetical protein FG09978.1; ... 47 3e-04
UniRef50_Q4HYI0 Cluster: RNA polymerase II transcription factor ... 47 3e-04
UniRef50_Q3E7C1 Cluster: RNA polymerase II transcription factor ... 47 4e-04
UniRef50_A2D7B4 Cluster: Transcription factor IIH, putative; n=1... 45 0.001
UniRef50_Q4WYX0 Cluster: RNA polymerase II transcription factor ... 45 0.001
UniRef50_Q00V71 Cluster: [S] KOG3451 Uncharacterized conserved p... 44 0.002
UniRef50_Q84QI3 Cluster: REX1-S; n=1; Chlamydomonas reinhardtii|... 43 0.005
UniRef50_Q9HDW3 Cluster: RNA polymerase II transcription factor ... 42 0.014
UniRef50_Q4TIF9 Cluster: Chromosome undetermined SCAF2182, whole... 41 0.018
UniRef50_A6SBR1 Cluster: Predicted protein; n=1; Botryotinia fuc... 39 0.073
UniRef50_A7AW70 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q2U864 Cluster: Predicted protein; n=1; Aspergillus ory... 38 0.22
UniRef50_Q9K1Y3 Cluster: Putative uncharacterized protein; n=2; ... 35 1.6
UniRef50_A5K3Z1 Cluster: REX1 DNA repair protein, putative; n=3;... 34 2.8
UniRef50_A6ARK2 Cluster: Phage integrase; n=1; Vibrio harveyi HY... 32 8.4
UniRef50_Q4P3B2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
>UniRef50_Q6ZYL4 Cluster: TFIIH basal transcription factor complex
TTD-A subunit; n=21; Eumetazoa|Rep: TFIIH basal
transcription factor complex TTD-A subunit - Homo
sapiens (Human)
Length = 71
Score = 102 bits (244), Expect = 7e-21
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
MVNV+KGVL+ECDPAMKQFLL+LDE+ ALG+KFI+QD+D+TH+F+ A++V LQ RV +L
Sbjct: 1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGEL 60
Query: 254 MDQLSIPVHDK 286
MDQ + + K
Sbjct: 61 MDQNAFSLTQK 71
>UniRef50_Q7Q3F7 Cluster: ENSANGP00000018539; n=5;
Endopterygota|Rep: ENSANGP00000018539 - Anopheles
gambiae str. PEST
Length = 157
Score = 90.2 bits (214), Expect = 3e-17
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +2
Query: 317 MTSRESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLVMSKKVPKFADS- 493
M RESGR+++A++++ QDNFHEDPHADLVMSKKVPKF+D+
Sbjct: 1 MAGRESGRIREADKKRTLDDAARQRRARKALEALEQDNFHEDPHADLVMSKKVPKFSDNL 60
Query: 494 -NEKPTRKK--KSKSAEYYKMRFRKTFAQLV 577
P++KK ++K AEYY+ ++RKTF QL+
Sbjct: 61 DGSGPSKKKHRRTKGAEYYRAKYRKTFPQLL 91
>UniRef50_Q9N390 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 71
Score = 80.2 bits (189), Expect = 3e-14
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
MVNV KGVLV DPA +Q L+HLD++ LG KFI+++LD+THLFI +IV L+ +V+ +
Sbjct: 1 MVNVKKGVLVTSDPAFRQLLIHLDDSRQLGSKFIVRELDDTHLFIEKEIVPMLENKVEQI 60
Query: 254 MDQLSIPVHDK 286
M+ ++ DK
Sbjct: 61 MENMNPEAVDK 71
>UniRef50_Q9LNA6 Cluster: F5O11.12; n=2; Arabidopsis thaliana|Rep:
F5O11.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +2
Query: 56 VLKQ*TMVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQ 235
VL+ MVN +KGV V CD M QF+++++ ++ +KFI+ LD THLF+ + + ++
Sbjct: 37 VLQVLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIR 96
Query: 236 ARVDDLMDQLS 268
+ + D DQ S
Sbjct: 97 SAISDFRDQNS 107
>UniRef50_Q0DK33 Cluster: Os05g0198700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os05g0198700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 165
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 62 KQ*TMVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQAR 241
K MVN +KG+ + CD M QF+++L+ ++ KFIL LD TH+F+ + E ++ +
Sbjct: 92 KSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGK 151
Query: 242 VDDLMDQLS 268
+ + DQ S
Sbjct: 152 ISEFRDQNS 160
>UniRef50_Q55CT8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 72
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISA---DIVETLQARV 244
MV+V KG+ +ECDP KQF+ E ++ F + LDETHLF+ ++ ++Q R+
Sbjct: 1 MVHVYKGLFLECDPPTKQFV----EYISKQEHFEVIVLDETHLFLQGGDEKVINSIQRRI 56
Query: 245 DDLMDQLSIPVHDK 286
DDL +Q + V DK
Sbjct: 57 DDLQNQNTYSVFDK 70
>UniRef50_Q4P985 Cluster: RNA polymerase II transcription factor B
subunit 5; n=2; Ustilago maydis|Rep: RNA polymerase II
transcription factor B subunit 5 - Ustilago maydis (Smut
fungus)
Length = 62
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 89 KGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVD 247
KG+L+ CD A+KQ +L LDE +FI+ DLDETHL IS D ++ L+A ++
Sbjct: 5 KGMLLTCDAAVKQLILSLDER----NRFIIMDLDETHLLISPDRIDWLRAELE 53
>UniRef50_Q55Z69 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 67
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2
Query: 77 VNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDLM 256
V + GVLV CD A KQ LLHLD KF+++D+DE + + + VE L+ D+L
Sbjct: 8 VKITSGVLVTCDSAAKQILLHLDSMRDGPHKFVIRDVDENRVMVKKEYVEMLK---DELQ 64
Query: 257 DQL 265
+++
Sbjct: 65 NEV 67
>UniRef50_O43257 Cluster: Zinc finger HIT domain-containing protein
1; n=21; Coelomata|Rep: Zinc finger HIT
domain-containing protein 1 - Homo sapiens (Human)
Length = 154
Score = 50.4 bits (115), Expect = 3e-05
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 326 RESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADL-VMSKKVPKFADSNEK 502
+ S R +D +R+V DNF +DPHA L + K++P+F D +
Sbjct: 5 KTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADT 64
Query: 503 PTRKKKSKSAEYYKMRFRKTFAQLV 577
+KKK++ +++K+RFRK F L+
Sbjct: 65 GKKKKKTR-GDHFKLRFRKNFQALL 88
>UniRef50_Q8X0V0 Cluster: RNA polymerase II transcription factor B
subunit 5; n=2; Sordariales|Rep: RNA polymerase II
transcription factor B subunit 5 - Neurospora crassa
Length = 72
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/67 (31%), Positives = 43/67 (64%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M ++GVL++C+PA+K ++HLD ++ I++DLDE L + ++V+ L+ +++D
Sbjct: 1 MPRAIRGVLIQCEPAIKSIIVHLD---SVNNDIIIEDLDEQTLVVKENMVQLLKQKLEDR 57
Query: 254 MDQLSIP 274
+ + P
Sbjct: 58 LKETYRP 64
>UniRef50_UPI0000E48363 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 102
Score = 49.6 bits (113), Expect = 5e-05
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 314 KMTSRESGRVKDAERRKVXXXXXXXXXXXXXXXXXXQDNFHEDPHADLV-MSKKVPKFAD 490
K +RESGR K+ +R+V QDNF EDPHA+LV + KK+P+F D
Sbjct: 4 KEQTRESGRQKELAQRRVLDSFTRAKRLRRQLEALEQDNFQEDPHANLVLLKKKLPQF-D 62
Query: 491 SNE 499
SNE
Sbjct: 63 SNE 65
>UniRef50_Q6C1B5 Cluster: RNA polymerase II transcription factor B
subunit 5; n=1; Yarrowia lipolytica|Rep: RNA polymerase
II transcription factor B subunit 5 - Yarrowia
lipolytica (Candida lipolytica)
Length = 75
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M +GVL+ECDP++K ++++D + IL +LD+THL I +VE ++ +++ +
Sbjct: 1 MPKATRGVLIECDPSIKALIVNIDSS---QHNIILDELDDTHLMIHPSMVEVVKQKLNKM 57
Query: 254 M 256
+
Sbjct: 58 L 58
>UniRef50_UPI000023CDDE Cluster: hypothetical protein FG09978.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09978.1 - Gibberella zeae PH-1
Length = 90
Score = 47.2 bits (107), Expect = 3e-04
Identities = 18/60 (30%), Positives = 40/60 (66%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M ++GVL+ECDP++K ++ +D + +I++DLD+ + + ++V L+A+++D+
Sbjct: 1 MPRAIRGVLIECDPSIKSIIVSID---SANHDYIIEDLDDERVVVKENMVSMLKAKLEDV 57
>UniRef50_Q4HYI0 Cluster: RNA polymerase II transcription factor B
subunit 5; n=1; Gibberella zeae|Rep: RNA polymerase II
transcription factor B subunit 5 - Gibberella zeae
(Fusarium graminearum)
Length = 73
Score = 47.2 bits (107), Expect = 3e-04
Identities = 18/60 (30%), Positives = 40/60 (66%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M ++GVL+ECDP++K ++ +D + +I++DLD+ + + ++V L+A+++D+
Sbjct: 1 MPRAIRGVLIECDPSIKSIIVSID---SANHDYIIEDLDDERVVVKENMVSMLKAKLEDV 57
>UniRef50_Q3E7C1 Cluster: RNA polymerase II transcription factor B
subunit 5; n=11; Saccharomycetales|Rep: RNA polymerase
II transcription factor B subunit 5 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 72
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M KG LV+CDP++K +L +D ++ +L++LD+THL ++ VE ++ ++ L
Sbjct: 1 MARARKGALVQCDPSIKALILQIDAKMS---DIVLEELDDTHLLVNPSKVEFVKHELNRL 57
Query: 254 MDQ 262
+ +
Sbjct: 58 LSK 60
>UniRef50_A2D7B4 Cluster: Transcription factor IIH, putative; n=1;
Trichomonas vaginalis G3|Rep: Transcription factor IIH,
putative - Trichomonas vaginalis G3
Length = 84
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 92 GVLVEC-DPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDLMDQLS 268
G +EC DPA++++L+ L+ KFI+ D+D+ +LFI A + + L+ +++ L+ +
Sbjct: 9 GEFIECTDPAIREYLIFLNSKEPAEHKFIITDIDDRYLFIKAGVSDKLKEKINLLVTSNT 68
Query: 269 IPVHDK 286
D+
Sbjct: 69 FSEEDR 74
>UniRef50_Q4WYX0 Cluster: RNA polymerase II transcription factor B
subunit 5; n=6; Pezizomycotina|Rep: RNA polymerase II
transcription factor B subunit 5 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 72
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDL-DETHLFISADIVETLQARVDD 250
M +KGVL+ECDP++K +L DE +I++DL D+ HL I ++ L+ R+
Sbjct: 1 MPRAIKGVLIECDPSVKAIILKYDEE---SHDYIVEDLDDDRHLVIKESQLQNLKERLGR 57
Query: 251 LMDQ 262
+D+
Sbjct: 58 ELDE 61
>UniRef50_Q00V71 Cluster: [S] KOG3451 Uncharacterized conserved
protein; n=2; Ostreococcus|Rep: [S] KOG3451
Uncharacterized conserved protein - Ostreococcus tauri
Length = 75
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVD 247
MV+ + GV++ D +KQ++LHLD KF++ DLDE + I + E ++ ++
Sbjct: 1 MVSAVHGVMLTTDVPIKQYVLHLDAIAPAEGKFVIADLDERRVLIQPERAEQVKREIE 58
>UniRef50_Q84QI3 Cluster: REX1-S; n=1; Chlamydomonas
reinhardtii|Rep: REX1-S - Chlamydomonas reinhardtii
Length = 78
Score = 43.2 bits (97), Expect = 0.005
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLD-ETLALGRK-FILQDLDETHLFISADIVETLQARVD 247
MV+ KG+L+ CD K +++H++ + A G+K FI+ DLDET L I+ ++A +
Sbjct: 1 MVSAKKGLLLRCDVPTKVYIVHMNSQYRAEGKKEFIIADLDETTLLINPAYELEIRAALK 60
Query: 248 DLMDQLS 268
D+L+
Sbjct: 61 KYSDELT 67
>UniRef50_Q9HDW3 Cluster: RNA polymerase II transcription factor B
subunit 5; n=1; Schizosaccharomyces pombe|Rep: RNA
polymerase II transcription factor B subunit 5 -
Schizosaccharomyces pombe (Fission yeast)
Length = 68
Score = 41.5 bits (93), Expect = 0.014
Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 74 MVNVMKGVL-VECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDD 250
M KG+L VECDP +KQ +L++DE +++++DE L ++ +E ++A ++
Sbjct: 1 MPRAQKGLLLVECDPTVKQLILNMDEQ---SPGIVIEEIDEERLLVNESRLEQVKAELER 57
Query: 251 LMDQLSIPVHD 283
+++ + V +
Sbjct: 58 RLEENTYQVEE 68
>UniRef50_Q4TIF9 Cluster: Chromosome undetermined SCAF2182, whole
genome shotgun sequence; n=6; Euteleostomi|Rep:
Chromosome undetermined SCAF2182, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 182
Score = 41.1 bits (92), Expect = 0.018
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +2
Query: 422 QDNFHEDPHADLVM---SKKVPKFADSNEKPTRKKKSKSAEYYKMRFRKTFAQLV 577
+DNF +DP + L + ++P F+++ E+P +KK+ +++K RFRK F L+
Sbjct: 26 KDNFQDDPLSSLPPPGPTARLPAFSET-EEPEKKKRKTRGDHFKQRFRKNFTALL 79
>UniRef50_A6SBR1 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 71
Score = 39.1 bits (87), Expect = 0.073
Identities = 18/66 (27%), Positives = 37/66 (56%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 253
M ++G LVECDP++K ++ +D ++I++DLD+ L I + L+A ++
Sbjct: 1 MTRAIRGTLVECDPSIKSLIVKID--AESHHEYIVEDLDDETLLIQESKLVHLKALLEKA 58
Query: 254 MDQLSI 271
+ + +
Sbjct: 59 LKETQV 64
>UniRef50_A7AW70 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 75
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARV 244
MV M+G+LV+CDP + + ++ET R FI++ LDE+ + + L V
Sbjct: 1 MVTSMRGILVKCDPPTMEIVKQINET----RHFIIEQLDESVALCQESVFDFLSEEV 53
>UniRef50_Q2U864 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 101
Score = 37.5 bits (83), Expect = 0.22
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 VLVECDPAMKQFLLHLDETLALGRKFILQDL-DETHLFISADIVETLQARVDDLMDQ 262
+L+ECDP++K +L DE +I++DL D+ HL I ++ L+ R+ +D+
Sbjct: 36 ILIECDPSVKAIILKYDEE---RHDYIVEDLDDDRHLVIKESQLQNLKIRLGRELDE 89
>UniRef50_Q9K1Y3 Cluster: Putative uncharacterized protein; n=2;
Chlamydophila pneumoniae|Rep: Putative uncharacterized
protein - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 243
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 222 WRLYKLALTI*WTSSAYPCTIKDYKLRVATSK*PHANLEESKMPREERFWMMWRENVVRE 401
+ L++L L W ++A + K+R A + LE++K PREE +W++ E +E
Sbjct: 145 FELHRLRLRAQWMANAEIYS----KVRKAFPEMLKETLEKAKAPREEEYWLLCEERKSKE 200
Query: 402 KQL 410
K+L
Sbjct: 201 KRL 203
>UniRef50_A5K3Z1 Cluster: REX1 DNA repair protein, putative; n=3;
Plasmodium|Rep: REX1 DNA repair protein, putative -
Plasmodium vivax
Length = 67
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 74 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARV 244
MV +KGVLV+CD Q +L ++E + F+++ + ET ++ + L+ V
Sbjct: 1 MVTAIKGVLVKCDEPTMQIILLMNE----DKNFLIEKISETVCLCKENVYDFLEKEV 53
>UniRef50_A6ARK2 Cluster: Phage integrase; n=1; Vibrio harveyi
HY01|Rep: Phage integrase - Vibrio harveyi HY01
Length = 517
Score = 32.3 bits (70), Expect = 8.4
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 ALGRKFILQDLDETHLFISADIVETLQA-RVDDLMDQL 265
ALGRK ++ E LFI D++E +Q+ D L+D L
Sbjct: 271 ALGRKMTTEEKGELPLFIDVDVIEEIQSIGADSLIDYL 308
>UniRef50_Q4P3B2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1210
Score = 32.3 bits (70), Expect = 8.4
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 80 NVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLD--ETHLFISADIVETLQARVDDL 253
+V+ G L+ + Q +L L E+ R+F + DL + + AD++ LQ +DD+
Sbjct: 650 SVLHGFLIVT--RLHQVMLELLESYRRDRRFPIDDLSVARSRIRYLADVLRRLQEAIDDM 707
Query: 254 MDQLSIPVH 280
++L P++
Sbjct: 708 PEELRNPIY 716
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,498,856
Number of Sequences: 1657284
Number of extensions: 10494572
Number of successful extensions: 24197
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 23541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24180
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -