Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0068
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   8.1  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   8.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 191 PPIISPSGPVWGSAGARPP 135
           PP     GP+ G AG+RPP
Sbjct: 594 PPSPLAGGPLGGPAGSRPP 612


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 181 SLHPDLSGALLAPDHLDYHLLLPFSLSHTKFEVNYL 74
           SL P L+GA+L        ++LP  +  T F+V  +
Sbjct: 484 SLPPPLTGAMLPSVQSAETVILPSGVLETPFDVQLI 519


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 159 PDRSGWRDYWRTSYTSADCCSEE 227
           P R  +R  W+T + S DCC  +
Sbjct: 427 PSRRCYR-CWQTDHISQDCCGPD 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,827
Number of Sequences: 2352
Number of extensions: 15325
Number of successful extensions: 50
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)