Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0067
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001471-1|AAN71226.1| 1048|Drosophila melanogaster LD03769p pro...    29   5.4  
AF247500-1|AAF63388.1| 1048|Drosophila melanogaster kinesin-like...    29   5.4  
AE014134-1877|AAF52943.2| 1048|Drosophila melanogaster CG5300-PA...    29   5.4  
AY119015-1|AAM50875.1|  246|Drosophila melanogaster LP04163p pro...    28   9.4  
AE014297-654|AAN13381.1|  237|Drosophila melanogaster CG31472-PB...    28   9.4  
AE014297-653|AAF54151.3|  246|Drosophila melanogaster CG31472-PA...    28   9.4  

>BT001471-1|AAN71226.1| 1048|Drosophila melanogaster LD03769p protein.
          Length = 1048

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 550  QNKENILIQI-QRAFLFKMLLNKKLTTNINTHVADVF 443
            Q KE++L ++ Q + + + +L   L+ N N H+AD+F
Sbjct: 919  QEKESLLKEVKQESGIQQQILQHFLSQNSNVHIADIF 955


>AF247500-1|AAF63388.1| 1048|Drosophila melanogaster kinesin-like
            protein protein.
          Length = 1048

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 550  QNKENILIQI-QRAFLFKMLLNKKLTTNINTHVADVF 443
            Q KE++L ++ Q + + + +L   L+ N N H+AD+F
Sbjct: 919  QEKESLLKEVKQESGIQQQILQHFLSQNSNVHIADIF 955


>AE014134-1877|AAF52943.2| 1048|Drosophila melanogaster CG5300-PA
            protein.
          Length = 1048

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 550  QNKENILIQI-QRAFLFKMLLNKKLTTNINTHVADVF 443
            Q KE++L ++ Q + + + +L   L+ N N H+AD+F
Sbjct: 919  QEKESLLKEVKQESGIQQQILQHFLSQNSNVHIADIF 955


>AY119015-1|AAM50875.1|  246|Drosophila melanogaster LP04163p
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 550 VAFTGMRIKY*EKDETFLEKHLVSKEPF 633
           V  + +R+KY E+ + FLE ++  K PF
Sbjct: 17  VPLSALRLKYCERKDAFLEDNIKVKNPF 44


>AE014297-654|AAN13381.1|  237|Drosophila melanogaster CG31472-PB,
           isoform B protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 550 VAFTGMRIKY*EKDETFLEKHLVSKEPF 633
           V  + +R+KY E+ + FLE ++  K PF
Sbjct: 8   VPLSALRLKYCERKDAFLEDNIKVKNPF 35


>AE014297-653|AAF54151.3|  246|Drosophila melanogaster CG31472-PA,
           isoform A protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 550 VAFTGMRIKY*EKDETFLEKHLVSKEPF 633
           V  + +R+KY E+ + FLE ++  K PF
Sbjct: 17  VPLSALRLKYCERKDAFLEDNIKVKNPF 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,810,318
Number of Sequences: 53049
Number of extensions: 327711
Number of successful extensions: 465
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)