Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0066
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   3.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    24   3.9  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    24   5.2  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -1

Query: 432 FCREAVTATPPFEPKRITASRRK*AGWWYLPVRTPQRSYN 313
           FC   V A PP   +R+   R    G W    R+P    N
Sbjct: 644 FCVSKVRAAPPTPRERVRCYRCLELGHWAHDCRSPDDRQN 683


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 326 WGVRTGRYHHPAYFRR 373
           WG+R G  +HP  + R
Sbjct: 406 WGIRCGEANHPGIYTR 421


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 112 KWRIAKGRLTAVVRSFSSLQLFSAVYQM*RIFNFYQN 2
           +WR+ + +LT    S    Q+F  + Q+   F  Y N
Sbjct: 129 EWRVLRQKLTPTFTSGRMKQMFGTIQQVAGEFLKYMN 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,644
Number of Sequences: 2352
Number of extensions: 13261
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)