Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0065
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 263 9e-71
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 262 2e-70
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 258 2e-69
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 184 6e-47
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 174 5e-44
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 168 3e-42
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 167 8e-42
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 158 5e-39
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 155 3e-38
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 153 1e-37
10_03_0034 + 7257033-7257045,7257074-7257104,7257880-7258009,725... 31 0.70
11_06_0455 + 23792326-23792442,23793720-23794125,23794474-237945... 31 0.93
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 31 0.93
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 30 1.6
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 30 2.1
09_04_0703 - 19614057-19614264,19615305-19615407,19615880-196159... 29 2.8
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 29 3.7
12_01_0490 + 3878436-3878466,3878559-3879113,3879218-3879777,388... 28 6.5
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 28 6.5
05_01_0395 + 3118480-3119097,3119699-3119989,3120063-3120114,312... 28 6.5
01_06_0208 - 27540077-27540992,27541310-27541497 28 6.5
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 28 6.5
06_03_1327 - 29356665-29357869,29358002-29358058,29358388-29358523 28 8.6
01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,423... 28 8.6
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 263 bits (645), Expect = 9e-71
Identities = 127/235 (54%), Positives = 163/235 (69%), Gaps = 1/235 (0%)
Frame = +1
Query: 19 DNAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRG 195
+N MLG RK NLPGI VDLP ++EKDK D+L +GV +DMI SF+R G+ L +R
Sbjct: 168 ENTAMLGERKNCNLPGIVVDLPTLTEKDKEDILGWGVPNDIDMIALSFVRKGSDLVTVRQ 227
Query: 196 ILGEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIAR 375
+LG+ K IK++SK+EN +G+VN DEI+ E+D MVARGDLG+EIP EK+FLAQK MI +
Sbjct: 228 LLGQHAKRIKLMSKVENQEGVVNFDEILRETDAFMVARGDLGMEIPVEKIFLAQKMMIYK 287
Query: 376 CNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVH 555
CN GKPV+ ATQMLESM+K PRPTRAE +DVANA+LDG DCVMLSGE+A G YP V
Sbjct: 288 CNLAGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEVAVK 347
Query: 556 TMANICKEAEAVIWHRQLFNDLVSEVKPPIDPXXXXXXXXXXXXTKCLASAIVVI 720
MA IC EAE+ + + +F +++ P+ P K A+ IVV+
Sbjct: 348 IMARICVEAESSLDNEAVFKEMIRSAPLPMSPLESLASSAVRTANKAKAALIVVL 402
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 262 bits (642), Expect = 2e-70
Identities = 125/235 (53%), Positives = 163/235 (69%), Gaps = 1/235 (0%)
Frame = +1
Query: 19 DNAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRG 195
+N MLG RK VNLPG+ VDLP ++EKDK D+L +GV +DMI SF+R G+ L E+R
Sbjct: 260 ENTAMLGERKNVNLPGVIVDLPTLTEKDKEDILKWGVPNKIDMIALSFVRKGSDLVEVRK 319
Query: 196 ILGEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIAR 375
+LG+ K+I ++SK+EN +G+ N D+I+A+SD MVARGDLG+EIP EK+F AQK MI +
Sbjct: 320 VLGKHAKSIMLMSKVENQEGVANFDDILAQSDAFMVARGDLGMEIPIEKIFYAQKVMIFK 379
Query: 376 CNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVH 555
CN GKPV+ ATQMLESM+K PRPTRAE +DVANA+LDG DCVMLSGETA G YP V
Sbjct: 380 CNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPELAVR 439
Query: 556 TMANICKEAEAVIWHRQLFNDLVSEVKPPIDPXXXXXXXXXXXXTKCLASAIVVI 720
TMA IC +AE+ + H +F + + P+ P A+ I+V+
Sbjct: 440 TMAKICLQAESCVDHAAVFKSITASAPIPMSPLESLASSAVRTANSAKAALILVL 494
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 258 bits (633), Expect = 2e-69
Identities = 125/212 (58%), Positives = 155/212 (73%), Gaps = 1/212 (0%)
Frame = +1
Query: 19 DNAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRG 195
+N+ MLG RK VNLPG+ VDLP ++EKDK D+L +GV +DMI SF+R G+ L +R
Sbjct: 151 ENSAMLGERKNVNLPGVIVDLPTLTEKDKVDILQWGVPNKIDMIALSFVRKGSDLMLVRS 210
Query: 196 ILGEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIAR 375
+LGE K+I ++SK+EN +G+ N+DEIIA SD MVARGDLG+EIP EK+F AQK MI +
Sbjct: 211 VLGEHAKSILLMSKVENQEGVANVDEIIANSDAFMVARGDLGMEIPIEKIFYAQKVMIHK 270
Query: 376 CNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVH 555
CN GKPV+ ATQMLESM+K P PTRAE +DVANA+LDG DCVM SGETA G YP V
Sbjct: 271 CNIHGKPVVTATQMLESMIKSPCPTRAEATDVANAVLDGTDCVMFSGETAAGAYPELAVQ 330
Query: 556 TMANICKEAEAVIWHRQLFNDLVSEVKPPIDP 651
TMANIC AE + + +F L SE P+ P
Sbjct: 331 TMANICSRAELYLDYPFIFKKLSSEAPVPLSP 362
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 184 bits (448), Expect = 6e-47
Identities = 89/202 (44%), Positives = 130/202 (64%)
Frame = +1
Query: 22 NAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGIL 201
+ G L SR+ +N+ G LP+++EKD D+ FGVE GVD SF+++ +HE++ L
Sbjct: 246 DGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYL 305
Query: 202 GEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCN 381
+I +I KIE+ + NL IIA SDG MVARGDLG E+P E+V L Q+ ++ C
Sbjct: 306 KSANADIHVIPKIESADSIPNLQSIIAASDGAMVARGDLGAELPIEEVPLLQEEIVRTCR 365
Query: 382 RVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVHTM 561
+ KPVI AT MLESM+ P PTRAE+SD+A A+ +G+D +MLSGETA G +P++ V M
Sbjct: 366 SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVM 425
Query: 562 ANICKEAEAVIWHRQLFNDLVS 627
+ + E+ +++ LV+
Sbjct: 426 HTVAQRTESSLYNPTTSPSLVA 447
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 174 bits (424), Expect = 5e-44
Identities = 86/191 (45%), Positives = 122/191 (63%)
Frame = +1
Query: 22 NAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGIL 201
+ G L SR+ +N+ G LP++++KD D+ FGVE VD SF+++ +HE++ L
Sbjct: 281 DGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELKDYL 340
Query: 202 GEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCN 381
+I +I KIE+ + NL II SDG MVARGDLG E+P E+V L Q+ +I C
Sbjct: 341 RSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRMCR 400
Query: 382 RVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVHTM 561
+GK VI AT MLESM+ P PTRAE+SD+A A+ +G+D +MLSGETA G +P++ V M
Sbjct: 401 SMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVM 460
Query: 562 ANICKEAEAVI 594
+ EA +
Sbjct: 461 HTVALRTEATM 471
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 168 bits (409), Expect = 3e-42
Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Frame = +1
Query: 16 QDNAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIR 192
++ A + GS ++ I +DLP +S++DK + +G +D + S+ R+ + + R
Sbjct: 152 KNTATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQAR 211
Query: 193 GILGEKG--KNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTM 366
L + G +I +KIEN +G+ N DEI+ E+DGI+++RG+LGI++PPEKVFL QK+
Sbjct: 212 EFLSKLGDLSQTQIFAKIENVEGLNNFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSA 271
Query: 367 IARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVE 546
+ +CN GKP + T++++SM RPTRAE +DVANA+LDG+D ++L ET +G YPVE
Sbjct: 272 LHKCNMAGKPAV-VTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVE 330
Query: 547 CVHTMANICKEAEAVIWHRQLFNDLVSEVKPPIDPXXXXXXXXXXXXTKCLASAIV 714
+ + IC EAE V F V V P+ K AS I+
Sbjct: 331 TISIVGKICAEAEKVFNQDLYFKRTVKHVGEPMTHLESIASSAVRAAIKVKASVII 386
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 167 bits (406), Expect = 8e-42
Identities = 89/236 (37%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
Frame = +1
Query: 16 QDNAGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIR 192
+++A + GS ++ I +DLP +S++DK + +G +D + S+ R+ + + R
Sbjct: 152 KNSATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAR 211
Query: 193 GILGEKG--KNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTM 366
L + G +I +KIEN +G+ + DEI+ E+DGI+++RG+LGI++PPEKVFL QK+
Sbjct: 212 EFLSKLGDLSQTQIFAKIENVEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSA 271
Query: 367 IARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVE 546
+ +CN GKP + T++++SM RPTRAE +DVANA+LDG+D ++L ET +G YPVE
Sbjct: 272 LHKCNMAGKPAV-VTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVE 330
Query: 547 CVHTMANICKEAEAVIWHRQLFNDLVSEVKPPIDPXXXXXXXXXXXXTKCLASAIV 714
+ + IC EAE V F V V P+ K AS I+
Sbjct: 331 TISIVGKICAEAEKVFNQDLYFKRTVKYVGEPMTHLESIASSAVRAAIKVKASVII 386
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 158 bits (383), Expect = 5e-39
Identities = 76/178 (42%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
Frame = +1
Query: 73 VDLPAVSEKDKSDL-LFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIEN 246
V LP +S+ DK + +G+ VD+I S R+ + E+R L G ++ +I +K+EN
Sbjct: 199 VSLPTLSDYDKEVISTWGLHNSVDIISLSHTRSAEDVRELRSFLQSHGLQDTQIYAKVEN 258
Query: 247 HQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLES 426
+G+ + DEI+ E+DG++++RGDLGI++PPE VF++QKT I +CN GKPVI T++++S
Sbjct: 259 TEGLDHFDEILQEADGVIISRGDLGIDLPPEDVFISQKTAIKKCNLAGKPVI-ITRVVDS 317
Query: 427 MVKKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVHTMANICKEAEAVIWH 600
M+ RPTRAE +DVANA+LDG D ++L ET +G YPV+ ++ N + ++ H
Sbjct: 318 MIDNLRPTRAEATDVANAVLDGTDGILLGAETHRGPYPVDAAESVYNQLVHFKKLVKH 375
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 155 bits (376), Expect = 3e-38
Identities = 74/178 (41%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Frame = +1
Query: 79 LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILG--EKGKNIKIISKIENHQ 252
LP +S KD D+ FG+ +GVD I SF+++ ++ ++ + +G +I +I+KIE+
Sbjct: 272 LPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVINHLKSYIAARSRGSDIAVIAKIESID 331
Query: 253 GMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMV 432
+ NL+EII SDG MVARGD+G +IP E+V Q+ ++ C ++ KPVI A+Q+LESM+
Sbjct: 332 SLKNLEEIIRASDGAMVARGDMGAQIPLEQVPSVQQKIVKLCRQLNKPVIVASQLLESMI 391
Query: 433 KKPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVHTMANICKEAEAVIWHRQ 606
+ P PTRAE++DV+ A+ AD +MLSGE+A G YP + + + ++ E W R+
Sbjct: 392 EYPTPTRAEVADVSEAVRQRADALMLSGESAMGRYPEKALSVLRSVSLRIEK--WWRE 447
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 153 bits (371), Expect = 1e-37
Identities = 76/177 (42%), Positives = 118/177 (66%), Gaps = 1/177 (0%)
Frame = +1
Query: 79 LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIENHQG 255
LP +S KD +D+ FG+ +GVD I SF+++ + ++ L K ++IKI +K+E+ +
Sbjct: 852 LPTLSAKDWADIEFGIAEGVDCIALSFVKDANDIKYLKTYLSRKSLEHIKIFAKVESLES 911
Query: 256 MVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVK 435
+ NL +II SDG+MVARGDLG++IP E++ Q+ ++ C R+ KPVI A+Q+LESMV+
Sbjct: 912 LKNLKDIIEASDGVMVARGDLGVQIPLEQIPAIQEAIVDLCRRLNKPVIVASQLLESMVE 971
Query: 436 KPRPTRAEISDVANAILDGADCVMLSGETAKGDYPVECVHTMANICKEAEAVIWHRQ 606
P PTRAE++DV+ A+ AD VMLS E+A G YP + + + + E+ W R+
Sbjct: 972 YPTPTRAEVADVSEAVRQYADAVMLSAESAIGAYPQKALAVLRAASERMES--WSRE 1026
>10_03_0034 +
7257033-7257045,7257074-7257104,7257880-7258009,
7258423-7258751,7259923-7260026,7260138-7260476,
7261074-7261199,7261366-7261489,7261615-7261723,
7262171-7262251
Length = 461
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 235 KIENHQGMVNLDEIIAESDGIMVARGD 315
+++N +G+ N D+I+A+S MVAR D
Sbjct: 435 RVKNQEGVANFDDILAKSVAFMVARVD 461
>11_06_0455 +
23792326-23792442,23793720-23794125,23794474-23794583,
23795063-23795125,23795478-23795504
Length = 240
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 170 PLRMNDAKIISTPCSTPKSRSDLSFSETAGRSTGMPGRLTPFRDP 36
PLR ND + + TP ST KS S ++ RS+ G P ++P
Sbjct: 109 PLRANDDEEMETPSSTHKS-SKTNYDTKMKRSSSTHGEKLPTKEP 152
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 478 AILDGADCVMLSGETAKGDYPVECVHTMANICKEAEAVIWHRQLFNDLVSEVK 636
A+LD DC+ L E KG Y C H +EA N L E++
Sbjct: 409 ALLDANDCIKLKPEWTKGHYRKGCAHMALKEYEEACTAFMAGTKLNPLNDEMQ 461
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Frame = +3
Query: 216 EHQDHLQDRKSPGNGQFRRDYS*IRWYHGCSRRSGYRD-PSRKGIPRPE--DHDRQMQSG 386
+ +DH +DR+S +G R +S R Y G R D +KGI R + DHD + S
Sbjct: 170 DDRDHSRDRRSDRSGASRETWS-SRDYEGRDSRGRRSDGDDQKGICREQRADHDDRKDSA 228
Query: 387 WKTSDLCDSNAGIHG*EA--------PSHQSRDL*RSQRHPRRS*LRDALRGD 521
+ D + G G + H+ R SQ H R A RG+
Sbjct: 229 RERRADRDESNGESGRSSRRGRSVSPEEHRHRGRHESQSHQSPRSSRSAARGE 281
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 478 AILDGADCVMLSGETAKGDYPVECVHTMANICKEA 582
A+LD DC+ L E KG Y C H +EA
Sbjct: 462 ALLDANDCIKLKPEWTKGYYRKGCAHMALKEYEEA 496
>09_04_0703 -
19614057-19614264,19615305-19615407,19615880-19615973,
19616216-19616229,19616384-19616595,19617653-19617940,
19618275-19618362,19618444-19618515,19618597-19618672,
19618755-19618813,19618953-19619016,19619253-19619402
Length = 475
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 399 HWFSNPIASGDHGLLGEEYLFWRDLDTQISASNHDTIGFSYNLV*IDHSLVIF 241
HWF +P+ GD+ + + R I+AS+ + I S++ + I+H VIF
Sbjct: 265 HWFLHPLVHGDYPPVMRSRVGVR--LPSITASDSEKIRGSFDFIGINHYYVIF 315
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 64 GIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIE 243
G+PV PA S+ + LL V + AS N LH GI+ ++ K+ K + +E
Sbjct: 365 GVPVPAPAPSDYAEEVLL----DAVASVSASGSSND--LHHCAGIVADRFKS-KALRDLE 417
Query: 244 N-HQGMVNL 267
N H MVNL
Sbjct: 418 NKHHWMVNL 426
>12_01_0490 +
3878436-3878466,3878559-3879113,3879218-3879777,
3880660-3880965,3881071-3881202,3881623-3881756,
3881939-3882015,3882084-3882226,3883376-3883633,
3884085-3884111
Length = 740
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 618 VIEELPVPDYSFS----LLANVGHGVNTLDRIVALGSLP 514
++E + VP+ SFS L+ N V L ++ ALGSLP
Sbjct: 470 LLENIKVPEASFSSKFWLMQNASGSVFKLPQLFALGSLP 508
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 56 TCPAYPWTYPQSPRRTSRTCSSASNKALI*FSRHSSAT 169
TC Y + YP+S +RTC L F+RH T
Sbjct: 526 TCFCYAFDYPRSDAAETRTCMIGKGN-LFTFARHVKTT 562
>05_01_0395 +
3118480-3119097,3119699-3119989,3120063-3120114,
3120395-3120546
Length = 370
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 179 SAAPLRMNDAKIISTPCSTPKSRSDLSFSETAGRSTGM 66
+A PL + I++TP S+P SRS + + G + G+
Sbjct: 254 TALPLSSLTSPILTTPMSSPTSRSGVGREKVGGDTLGV 291
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 127 RRRRAGPTCPSRRLRVG 77
RRRRAG CP+R+ R G
Sbjct: 84 RRRRAGAACPARQQRCG 100
>01_05_0658 -
24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 178 LHEIRGILGEKGKNIKIISKIENHQGMVNLDEIIAESDGIMVARGDLGIEIPPEKVFLAQ 357
LH+I GI+ K KNI S + G +++ + + +++ DL I E
Sbjct: 194 LHDISGIIKPKSKNIVQFSGQVTYNGH-QMEDFVPQRTAAYISQHDLHI---GEMTVRET 249
Query: 358 KTMIARCNRVGKPVICATQM 417
+ ARC VG T++
Sbjct: 250 LSFSARCQGVGSRFDMLTEL 269
>06_03_1327 - 29356665-29357869,29358002-29358058,29358388-29358523
Length = 465
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 181 HEIRGILGEKGKNIKI-ISKIENHQGMVNLDEIIAESDGI--MVARGDLGIEIP 333
H IR +K K ++ + + + VNLDEI+A ++G+ VA +L IP
Sbjct: 286 HAIRMEEEDKSKKPRLLVINRRSRRRFVNLDEIVAAAEGVGFEVAAAELDAHIP 339
>01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,
4235329-4235470,4235519-4235905,4236045-4236230,
4236382-4236659,4236757-4236883,4237270-4237442,
4237610-4237657,4237734-4237767,4237837-4237965,
4238865-4238960,4239419-4239485,4240030-4240085,
4240522-4240617,4241127-4242222,4243221-4243402
Length = 1244
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 449 VGRGFLTMDSSI*VAQITGFPTRLHLAIMVF 357
+GRG T D + GF T LHL+I VF
Sbjct: 1060 LGRGTSTFDGYAIAYALMGFMTLLHLSIKVF 1090
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,954,348
Number of Sequences: 37544
Number of extensions: 449416
Number of successful extensions: 1518
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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