Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0064
         (377 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p pro...    66   1e-11
AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3 ...    66   1e-11
AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta p...    66   1e-11
AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic i...    66   1e-11
AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA ...    66   1e-11
U36791-1|AAC46927.1|  601|Drosophila melanogaster DHR78 protein.       29   2.0  
AY058317-1|AAL13546.1|  599|Drosophila melanogaster GH08073p pro...    29   2.0  
AE014296-3548|AAS65089.1|  601|Drosophila melanogaster CG7199-PD...    29   2.0  
AE014296-3547|AAN12169.1|  601|Drosophila melanogaster CG7199-PC...    29   2.0  
AE014296-3546|AAN12168.1|  601|Drosophila melanogaster CG7199-PB...    29   2.0  
AE014296-3545|AAF51731.1|  599|Drosophila melanogaster CG7199-PA...    29   2.0  
AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p pro...    29   2.6  
AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.     29   2.6  
AE013599-2476|AAM70877.1|  394|Drosophila melanogaster CG4816-PC...    29   2.6  
AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB...    29   2.6  
AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA...    29   2.6  
AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p pro...    28   3.5  
AY071654-1|AAL49276.1|  384|Drosophila melanogaster RE73487p pro...    28   3.5  
AY061173-1|AAL28721.1|  384|Drosophila melanogaster LD14127p pro...    28   3.5  
AE014297-4497|AAF56982.2|  384|Drosophila melanogaster CG7903-PA...    28   3.5  
AE014297-2496|AAF55533.1|  384|Drosophila melanogaster CG18600-P...    28   3.5  
AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-P...    28   3.5  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    28   3.5  
BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p pro...    27   6.1  
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    27   6.1  
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P...    27   6.1  
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P...    27   6.1  

>BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p
           protein.
          Length = 352

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 17  ASVDQFQSGEGVGESLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTELETMRSS 190
           A V  F        SL  LV  T   + S+  S  Q  LRE + DH+ E+ TELET   +
Sbjct: 91  AKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN 150

Query: 191 ITSQAREHVRADEVLLTFGASALVERFLRPTXNRN--CKVVVAEGTDVGESHAMARRLSN 364
           I  QA EH+ + E++LT G S  VE FL+    +     ++VAE       H +A  L+N
Sbjct: 151 ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAASLAN 210


>AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3
           protein.
          Length = 352

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 17  ASVDQFQSGEGVGESLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTELETMRSS 190
           A V  F        SL  LV  T   + S+  S  Q  LRE + DH+ E+ TELET   +
Sbjct: 91  AKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN 150

Query: 191 ITSQAREHVRADEVLLTFGASALVERFLRPTXNRN--CKVVVAEGTDVGESHAMARRLSN 364
           I  QA EH+ + E++LT G S  VE FL+    +     ++VAE       H +A  L+N
Sbjct: 151 ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAASLAN 210


>AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta
           protein protein.
          Length = 352

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 17  ASVDQFQSGEGVGESLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTELETMRSS 190
           A V  F        SL  LV  T   + S+  S  Q  LRE + DH+ E+ TELET   +
Sbjct: 91  AKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN 150

Query: 191 ITSQAREHVRADEVLLTFGASALVERFLRPTXNRN--CKVVVAEGTDVGESHAMARRLSN 364
           I  QA EH+ + E++LT G S  VE FL+    +     ++VAE       H +A  L+N
Sbjct: 151 ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAASLAN 210


>AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic
           initiation factor eIF2Bbeta subunit protein.
          Length = 352

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 17  ASVDQFQSGEGVGESLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTELETMRSS 190
           A V  F        SL  LV  T   + S+  S  Q  LRE + DH+ E+ TELET   +
Sbjct: 91  AKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN 150

Query: 191 ITSQAREHVRADEVLLTFGASALVERFLRPTXNRN--CKVVVAEGTDVGESHAMARRLSN 364
           I  QA EH+ + E++LT G S  VE FL+    +     ++VAE       H +A  L+N
Sbjct: 151 ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAASLAN 210


>AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA
           protein.
          Length = 352

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 17  ASVDQFQSGEGVGESLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTELETMRSS 190
           A V  F        SL  LV  T   + S+  S  Q  LRE + DH+ E+ TELET   +
Sbjct: 91  AKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN 150

Query: 191 ITSQAREHVRADEVLLTFGASALVERFLRPTXNRN--CKVVVAEGTDVGESHAMARRLSN 364
           I  QA EH+ + E++LT G S  VE FL+    +     ++VAE       H +A  L+N
Sbjct: 151 ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAASLAN 210


>U36791-1|AAC46927.1|  601|Drosophila melanogaster DHR78 protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220

Query: 203 AREH 214
            ++H
Sbjct: 221 QQQH 224


>AY058317-1|AAL13546.1|  599|Drosophila melanogaster GH08073p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 160 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 218

Query: 203 AREH 214
            ++H
Sbjct: 219 QQQH 222


>AE014296-3548|AAS65089.1|  601|Drosophila melanogaster CG7199-PD,
           isoform D protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220

Query: 203 AREH 214
            ++H
Sbjct: 221 QQQH 224


>AE014296-3547|AAN12169.1|  601|Drosophila melanogaster CG7199-PC,
           isoform C protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220

Query: 203 AREH 214
            ++H
Sbjct: 221 QQQH 224


>AE014296-3546|AAN12168.1|  601|Drosophila melanogaster CG7199-PB,
           isoform B protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220

Query: 203 AREH 214
            ++H
Sbjct: 221 QQQH 224


>AE014296-3545|AAF51731.1|  599|Drosophila melanogaster CG7199-PA,
           isoform A protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 32  FQSGEGVGESLQGLVLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRSSITSQ 202
           +Q G G G S++    ATP  HS  P+T  +L E   P+  + AEL   L         Q
Sbjct: 160 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 218

Query: 203 AREH 214
            ++H
Sbjct: 219 QQQH 222


>AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p
           protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  GSGDSGPAQHRAFNGSGLEGTNKRSH 150
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  GSGDSGPAQHRAFNGSGLEGTNKRSH 150
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AE013599-2476|AAM70877.1|  394|Drosophila melanogaster CG4816-PC,
           isoform C protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  GSGDSGPAQHRAFNGSGLEGTNKRSH 150
           G G  G +Q  A  GSGL   + RSH
Sbjct: 366 GLGTGGASQSNAIGGSGLSSNHNRSH 391


>AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB,
           isoform B protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  GSGDSGPAQHRAFNGSGLEGTNKRSH 150
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA,
           isoform A protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  GSGDSGPAQHRAFNGSGLEGTNKRSH 150
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p protein.
          Length = 1211

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +2

Query: 14   RASVDQFQSGEGVGESLQGLV-LATPARHSIVPSTDQDLREPIRDHIAELRTELETMRSS 190
            R S +QF  G+   E L+ LV  AT A     P T    RE  R   A+ ++   T+++ 
Sbjct: 1143 RQSEEQFTDGDD--EILESLVKTATKA-----PGTRTTPRERKRTRHADRKSLRRTLKNG 1195

Query: 191  ITSQAREHVRA 223
            +T + ++HV A
Sbjct: 1196 LTEEEKQHVAA 1206


>AY071654-1|AAL49276.1|  384|Drosophila melanogaster RE73487p
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +1

Query: 58  ESPRSGSGDSGPAQHRAFNGSGLEGTNKRSHRR 156
           E P  GSG  GP Q   FNG    G N   +RR
Sbjct: 352 EFPPLGSGGGGPGQRNRFNGP-RPGPNMGGNRR 383


>AY061173-1|AAL28721.1|  384|Drosophila melanogaster LD14127p
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +2

Query: 2   RDENRASVDQFQSGEGVGESLQGLVLAT--PARHSIVPSTDQDLREPIRDHIAELRTELE 175
           RDEN  ++ +FQ+G  +G++   +V +T    +H++V + DQ     ++D   E+ T + 
Sbjct: 15  RDENIPTILKFQNGSLLGDADFSMVESTVDGKKHALVYAGDQVYTGEVKDS-EEVDTYI- 72

Query: 176 TMRSSITSQAREHVRADEVLLTFGASALVERFLR--PTXNR 292
            +R+ +T++ +  V   E L+       +ER  R  PT +R
Sbjct: 73  FIRNKLTNKVKV-VPVQEALMYNHVYKKLERQKRTGPTMSR 112


>AE014297-4497|AAF56982.2|  384|Drosophila melanogaster CG7903-PA
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +1

Query: 58  ESPRSGSGDSGPAQHRAFNGSGLEGTNKRSHRR 156
           E P  GSG  GP Q   FNG    G N   +RR
Sbjct: 352 EFPPLGSGGGGPGQRNRFNGP-RPGPNMGGNRR 383


>AE014297-2496|AAF55533.1|  384|Drosophila melanogaster CG18600-PA
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +2

Query: 2   RDENRASVDQFQSGEGVGESLQGLVLAT--PARHSIVPSTDQDLREPIRDHIAELRTELE 175
           RDEN  ++ +FQ+G  +G++   +V +T    +H++V + DQ     ++D   E+ T + 
Sbjct: 15  RDENIPTILKFQNGSLLGDADFSMVESTVDGKKHALVYAGDQVYTGEVKDS-EEVDTYI- 72

Query: 176 TMRSSITSQAREHVRADEVLLTFGASALVERFLR--PTXNR 292
            +R+ +T++ +  V   E L+       +ER  R  PT +R
Sbjct: 73  FIRNKLTNKVKV-VPVQEALMYNHVYKKLERQKRTGPTMSR 112


>AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-PA,
            isoform A protein.
          Length = 1393

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +2

Query: 14   RASVDQFQSGEGVGESLQGLV-LATPARHSIVPSTDQDLREPIRDHIAELRTELETMRSS 190
            R S +QF  G+   E L+ LV  AT A     P T    RE  R   A+ ++   T+++ 
Sbjct: 1325 RQSEEQFTDGDD--EILESLVKTATKA-----PGTRTTPRERKRTRHADRKSLRRTLKNG 1377

Query: 191  ITSQAREHVRA 223
            +T + ++HV A
Sbjct: 1378 LTEEEKQHVAA 1388


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 92  GPESPEPDLGDSLLHPHHSGTG 27
           GP  P P  G    HPHH G G
Sbjct: 444 GPGGPGPPHGGHPHHPHHGGAG 465


>BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p
           protein.
          Length = 1084

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 DQDLREPIRDHIAELRTELETMRSSITSQAREHVRADE 229
           +Q + EP  +H  +LR++   ++  + + +REH+ +++
Sbjct: 693 EQPIEEPTDNHQYKLRSDTNKLKELMFTDSREHLESEK 730


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
           protein.
          Length = 1193

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 DQDLREPIRDHIAELRTELETMRSSITSQAREHVRADE 229
           +Q + EP  +H  +LR++   ++  + + +REH+ +++
Sbjct: 595 EQPIEEPTDNHQYKLRSDTNKLKELMFTDSREHLESEK 632


>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
           isoform B protein.
          Length = 1304

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 DQDLREPIRDHIAELRTELETMRSSITSQAREHVRADE 229
           +Q + EP  +H  +LR++   ++  + + +REH+ +++
Sbjct: 706 EQPIEEPTDNHQYKLRSDTNKLKELMFTDSREHLESEK 743


>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
           isoform A protein.
          Length = 1469

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 DQDLREPIRDHIAELRTELETMRSSITSQAREHVRADE 229
           +Q + EP  +H  +LR++   ++  + + +REH+ +++
Sbjct: 871 EQPIEEPTDNHQYKLRSDTNKLKELMFTDSREHLESEK 908


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,397,620
Number of Sequences: 53049
Number of extensions: 315527
Number of successful extensions: 1095
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)