Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0061
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   1.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   1.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   1.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   7.6  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    20   7.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   7.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 181 ESDCTGCSDKRK 216
           E+DC+ CS+K+K
Sbjct: 74  ETDCSKCSEKQK 85


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 181 ESDCTGCSDKRKIQHEK 231
           +SDC  CS+K+K   +K
Sbjct: 67  KSDCAKCSEKQKEMTKK 83


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 240 VASFFVLYFAFVATTGAVTFVI 175
           V  F+V+  AF+ T GA+  ++
Sbjct: 100 VQKFYVVILAFLLTAGAIISLV 121


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 240 VASFFVLYFAFVATTGAVTFVI 175
           V  F+V+  AF+ T GA+  ++
Sbjct: 26  VQKFYVVILAFLLTAGAIISLV 47


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 118 YYFYKTQIYLVI 83
           +YFYKT+ + V+
Sbjct: 42  FYFYKTEQFTVL 53


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 184 SDCTGCSDKRKIQHEK 231
           S CT C+ K+K   EK
Sbjct: 72  SGCTKCNQKQKETAEK 87


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 211 VCRYNRCSHFRD 176
           VC YN  ++FRD
Sbjct: 22  VCYYNSKAYFRD 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,361
Number of Sequences: 336
Number of extensions: 1680
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)