Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0061
(392 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-669|AAN09129.1| 399|Drosophila melanogaster CG7010-PD,... 71 5e-13
AE014298-668|AAF45976.1| 399|Drosophila melanogaster CG7010-PA,... 71 5e-13
AE014298-667|AAF45977.1| 443|Drosophila melanogaster CG7010-PC,... 71 5e-13
BT010310-1|AAQ23628.1| 479|Drosophila melanogaster AT31065p pro... 46 1e-05
AE014298-671|AAF45979.1| 479|Drosophila melanogaster CG7024-PA ... 46 1e-05
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 31 0.41
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 31 0.41
BT010068-1|AAQ22537.1| 328|Drosophila melanogaster LD13846p pro... 27 6.7
AE014298-670|AAF45978.1| 328|Drosophila melanogaster CG7010-PB,... 27 6.7
>AE014298-669|AAN09129.1| 399|Drosophila melanogaster CG7010-PD,
isoform D protein.
Length = 399
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 191 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETG 367
A V TN Y+T EAT ++ +P+KLH+LD+GPAT LT + ALK Y Q+ +RR+ET
Sbjct: 25 AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 81
Query: 368 *GNLYKEK 391
GNLYKEK
Sbjct: 82 AGNLYKEK 89
>AE014298-668|AAF45976.1| 399|Drosophila melanogaster CG7010-PA,
isoform A protein.
Length = 399
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 191 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETG 367
A V TN Y+T EAT ++ +P+KLH+LD+GPAT LT + ALK Y Q+ +RR+ET
Sbjct: 25 AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 81
Query: 368 *GNLYKEK 391
GNLYKEK
Sbjct: 82 AGNLYKEK 89
>AE014298-667|AAF45977.1| 443|Drosophila melanogaster CG7010-PC,
isoform C protein.
Length = 443
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 191 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETG 367
A V TN Y+T EAT ++ +P+KLH+LD+GPAT LT + ALK Y Q+ +RR+ET
Sbjct: 69 AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 125
Query: 368 *GNLYKEK 391
GNLYKEK
Sbjct: 126 AGNLYKEK 133
>BT010310-1|AAQ23628.1| 479|Drosophila melanogaster AT31065p
protein.
Length = 479
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 257 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETG*GNLYKEK 391
+K + L+ GP L+ EDAL +Y Q+ LRR ET GN YKE+
Sbjct: 43 FKCYDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKER 87
>AE014298-671|AAF45979.1| 479|Drosophila melanogaster CG7024-PA
protein.
Length = 479
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 257 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETG*GNLYKEK 391
+K + L+ GP L+ EDAL +Y Q+ LRR ET GN YKE+
Sbjct: 43 FKCYDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKER 87
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 192 HRL*RQTQNTARKKRRHSKSSPTNSINWIRALQHQPHSLLKMLLSCMNN*RYCGGLKPDE 371
H ++ A K++R S++ N+ NW+R L+ P M + R C E
Sbjct: 189 HEFGTKSYVAAMKQKRISETEAFNNFNWLRWLRWHPWLERSMPTGTIGTCRICSVRMNVE 248
Query: 372 ETYIKKR 392
Y++KR
Sbjct: 249 FVYLRKR 255
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 192 HRL*RQTQNTARKKRRHSKSSPTNSINWIRALQHQPHSLLKMLLSCMNN*RYCGGLKPDE 371
H ++ A K++R S++ N+ NW+R L+ P M + R C E
Sbjct: 270 HEFGTKSYVAAMKQKRISETEAFNNFNWLRWLRWHPWLERSMPTGTIGTCRICSVRMNVE 329
Query: 372 ETYIKKR 392
Y++KR
Sbjct: 330 FVYLRKR 336
>BT010068-1|AAQ22537.1| 328|Drosophila melanogaster LD13846p
protein.
Length = 328
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 347 LRRIETG*GNLYKEK 391
+RR+ET GNLYKEK
Sbjct: 4 IRRLETAAGNLYKEK 18
>AE014298-670|AAF45978.1| 328|Drosophila melanogaster CG7010-PB,
isoform B protein.
Length = 328
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 347 LRRIETG*GNLYKEK 391
+RR+ET GNLYKEK
Sbjct: 4 IRRLETAAGNLYKEK 18
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,778
Number of Sequences: 53049
Number of extensions: 301198
Number of successful extensions: 806
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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