Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0057
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 155 1e-37
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 155 1e-37
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 155 1e-37
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 155 1e-37
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 155 1e-37
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 143 5e-34
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 142 8e-34
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 142 1e-33
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 142 1e-33
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 142 1e-33
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 142 1e-33
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 136 7e-32
BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein. 33 1.3
AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein. 33 1.3
AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein. 33 1.3
S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protei... 30 7.2
D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protei... 30 7.2
BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding prot... 30 7.2
AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding prot... 30 7.2
AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding prot... 30 7.2
AK094877-1|BAC04447.1| 138|Homo sapiens protein ( Homo sapiens ... 30 9.5
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 155 bits (377), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTFM+E G+ PPG +TWQFNFKF T
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT 104
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 132
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 155 bits (377), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTFM+E G+ PPG +TWQFNFKF T
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT 104
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 132
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 155 bits (377), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTFM+E G+ PPG +TWQFNFKF T
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT 104
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 132
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 155 bits (377), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTFM+E G+ PPG +TWQFNFKF T
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT 104
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 132
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 155 bits (377), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTFM+E G+ PPG +TWQFNFKF T
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT 104
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 132
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 143 bits (347), Expect = 5e-34
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +2
Query: 392 IRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENG 571
IRQV++KY++VAMDTEFPGVVARPIGEFRS ADYQYQLLRCNVDLL+IIQLGLTFM+E G
Sbjct: 4 IRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQG 63
Query: 572 KTPPGYTTWQFNFKFQST 625
+ PPG +TWQFNFKF T
Sbjct: 64 EYPPGTSTWQFNFKFNLT 81
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMYAQDSI+LL SG+QF+KHEE+GIE
Sbjct: 78 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIE 109
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 142 bits (345), Expect = 8e-34
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVPSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFNFKF T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLT 104
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 101 FNLTEDMYSQDSIDLLANSGLQFQKHEEEGID 132
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 142 bits (344), Expect = 1e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFNFKF T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLT 104
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 101 FNLTEDMYSQDSIDLLANSGLQFQKHEEEGID 132
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 142 bits (344), Expect = 1e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFNFKF T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLT 104
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 101 FNLTEDMYSQDSIDLLANSGLQFQKHEEEGID 132
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 142 bits (344), Expect = 1e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFNFKF T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLT 104
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 101 FNLTEDMYSQDSIDLLANSGLQFQKHEEEGID 132
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 142 bits (344), Expect = 1e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFNFKF T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLT 104
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
FNL EDMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 101 FNLTEDMYSQDSIDLLANSGLQFQKHEEEGID 132
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 136 bits (329), Expect = 7e-32
Identities = 62/93 (66%), Positives = 72/93 (77%)
Frame = +2
Query: 347 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 526
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ DYQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 527 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFQST 625
L+IIQLGLTF +E G+ P G TWQFN K T
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNCKLYLT 104
Score = 53.6 bits (123), Expect = 7e-07
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Frame = +3
Query: 597 GNSTLNFN----LQEDMYAQDSIDLLQNSGLQFRKHEEDGIE 710
G +T FN L DMY+QDSIDLL NSGLQF+KHEE+GI+
Sbjct: 91 GINTWQFNCKLYLTVDMYSQDSIDLLANSGLQFQKHEEEGID 132
>BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein.
Length = 851
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 374 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 553
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 471 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 530
Query: 554 FMDENGKTPPGYT 592
+ + G PG T
Sbjct: 531 VVPQPG---PGLT 540
>AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein.
Length = 616
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 374 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 553
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 289 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 348
Query: 554 FMDENGKTPPGYT 592
+ + G PG T
Sbjct: 349 VVPQPG---PGLT 358
>AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein.
Length = 233
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 374 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLT 553
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 48 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 107
Query: 554 FMDENGKTPPGYT 592
+ + G PG T
Sbjct: 108 VVPQPG---PGLT 117
>S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 382
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 383 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 475
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 382
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 383 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 475
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 382
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 383 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 475
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 382
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 383 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 475
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FVQNTQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISLPGGSDCGIKDVWNHNLHEE 382
F++ T +K K + D S+ D Y S + S LPG CG ++ +
Sbjct: 258 FIKVTNDKVKW---EYCDVSACSAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRI 314
Query: 383 FQIIRQVVQKYHWVA-MDTEFPGVVARPIGEF 475
+ + K+ W A + + P ++ P G F
Sbjct: 315 YGGFKSTAGKHPWQASLQSSLPLTISMPQGHF 346
>AK094877-1|BAC04447.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ37558 fis, clone BRCOC1000087. ).
Length = 138
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 52 SCNKISEKKPIILSCDSIFPRNVFKLIPQQYSMFIDNL 165
SC ISEK+ ++L C + PR + P ID++
Sbjct: 53 SCESISEKQSLVLVCQKLLPRLLQGRFPSPVQDDIDSI 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,992,690
Number of Sequences: 237096
Number of extensions: 2245249
Number of successful extensions: 4264
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4264
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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