Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0057
(713 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY047553-1|AAK77285.1| 297|Drosophila melanogaster GH06247p pro... 192 5e-49
AE014296-2077|AAF49972.2| 297|Drosophila melanogaster CG5684-PA... 192 5e-49
BT001837-1|AAN71594.1| 293|Drosophila melanogaster RH51274p pro... 190 1e-48
BT001830-1|AAN71585.1| 293|Drosophila melanogaster RH46192p pro... 190 1e-48
AE014296-2079|AAN12249.1| 293|Drosophila melanogaster CG5684-PC... 190 1e-48
AE014296-2078|AAN12248.1| 293|Drosophila melanogaster CG5684-PB... 190 1e-48
AY122139-1|AAM52651.1| 271|Drosophila melanogaster GM14316p pro... 69 8e-12
AE014297-398|AAF51922.1| 743|Drosophila melanogaster CG15580-PA... 29 6.3
>AY047553-1|AAK77285.1| 297|Drosophila melanogaster GH06247p
protein.
Length = 297
Score = 192 bits (467), Expect = 5e-49
Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%)
Frame = +2
Query: 284 RYKMPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVA 457
++ MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVA
Sbjct: 2 KWTMPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVA 61
Query: 458 RPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
RP+GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 62 RPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 114
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 114 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 146
>AE014296-2077|AAF49972.2| 297|Drosophila melanogaster CG5684-PA,
isoform A protein.
Length = 297
Score = 192 bits (467), Expect = 5e-49
Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%)
Frame = +2
Query: 284 RYKMPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVA 457
++ MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVA
Sbjct: 2 KWTMPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVA 61
Query: 458 RPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
RP+GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 62 RPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 114
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 114 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 146
>BT001837-1|AAN71594.1| 293|Drosophila melanogaster RH51274p
protein.
Length = 293
Score = 190 bits (464), Expect = 1e-48
Identities = 85/110 (77%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
Frame = +2
Query: 293 MPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPI 466
MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVARP+
Sbjct: 1 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPV 60
Query: 467 GEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 61 GEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 110
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 110 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 142
>BT001830-1|AAN71585.1| 293|Drosophila melanogaster RH46192p
protein.
Length = 293
Score = 190 bits (464), Expect = 1e-48
Identities = 85/110 (77%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
Frame = +2
Query: 293 MPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPI 466
MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVARP+
Sbjct: 1 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPV 60
Query: 467 GEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 61 GEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 110
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 110 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 142
>AE014296-2079|AAN12249.1| 293|Drosophila melanogaster CG5684-PC,
isoform C protein.
Length = 293
Score = 190 bits (464), Expect = 1e-48
Identities = 85/110 (77%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
Frame = +2
Query: 293 MPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPI 466
MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVARP+
Sbjct: 1 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPV 60
Query: 467 GEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 61 GEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 110
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 110 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 142
>AE014296-2078|AAN12248.1| 293|Drosophila melanogaster CG5684-PB,
isoform B protein.
Length = 293
Score = 190 bits (464), Expect = 1e-48
Identities = 85/110 (77%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
Frame = +2
Query: 293 MPSASFGS--ISLPGGSDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPI 466
MPSA G+ +P +CGI+DVW NL EEF+ IR+VVQKYH+VAMDTEFPGVVARP+
Sbjct: 1 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPV 60
Query: 467 GEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKF 616
GEFRSTADY YQLLRCNVDLLRIIQLGLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 61 GEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKF 110
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 110 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 142
>AY122139-1|AAM52651.1| 271|Drosophila melanogaster GM14316p
protein.
Length = 271
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 615 FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEP 713
FNL EDMYAQDSIDLLQNSG+QF+KHEEDGI+P
Sbjct: 24 FNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDP 56
Score = 56.0 bits (129), Expect = 5e-08
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +2
Query: 545 GLTFMDENGKTPPGYTTWQFNFKF 616
GLTFMD++GKTPPGY+TWQFNFKF
Sbjct: 1 GLTFMDDDGKTPPGYSTWQFNFKF 24
>AE014297-398|AAF51922.1| 743|Drosophila melanogaster CG15580-PA,
isoform A protein.
Length = 743
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 222 INRKPRRRKKQIILLVWKRINDTRCRP-QVLVPYHF 326
+N KP+RR Q+ +VW+ +N R Q L Y F
Sbjct: 156 VNVKPQRRLAQLAEIVWQYVNSMHIRKLQALPDYAF 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,518,955
Number of Sequences: 53049
Number of extensions: 698084
Number of successful extensions: 1928
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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