Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0055
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    26   1.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.8  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   2.3  
AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450 pr...    25   3.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   3.1  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.2  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   9.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.5  

>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 674 RHLIRRLQHIVTMPARYRYERHSSGIVTN-FLNV 576
           R  ++ L H  T+P    +ER  S I+TN FLNV
Sbjct: 59  RFSVKFLMHDRTVPKEDSFERKVSYIMTNWFLNV 92


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 530  GRFG--RVHFIHADNKLFYAKSESKQGVFASLSILTDT 423
            GRFG  +VH+ HA+N L         G F  L    DT
Sbjct: 1258 GRFGWFKVHYNHANNTLSTKSVYDSTGKFVKLVQPADT 1295


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 530  GRFG--RVHFIHADNKLFYAKSESKQGVFASLSILTDT 423
            GRFG  +VH+ HA+N L         G F  L    DT
Sbjct: 1259 GRFGWFKVHYNHANNTLSTKSVYDSTGKFVKLVQPADT 1296


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 623 RYERHSSGIVTNFLNVRRHFFLNLFIASLM 534
           R ER+  G     +N+ RHF L L I +++
Sbjct: 357 RLERYRHGATQLNINLLRHFLLQLTIVAVL 386


>AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 585 KIGYNPATVAFVPISGWHGDNMLEPS 662
           K   +  TV F+PI+G H D    P+
Sbjct: 35  KFTIDKGTVVFIPIAGLHHDPQYYPN 60


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 622 RYLAGMVTICWSLLIRCLGSRGGPS 696
           RY     T  W+ L+R + ++ GPS
Sbjct: 727 RYAVERATKLWTTLVRMMPNKAGPS 751


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -1

Query: 499 PTISCFTPRVKASRACSRVCPFLLIPASNSP 407
           P   CF P   ++ AC    P+  +P    P
Sbjct: 421 PEPECFDPDRFSAEACRNRTPYTFLPFGEGP 451


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 717 RLCRPCDRWSTP*TKASYQK 658
           RL  P D+W TP T   + K
Sbjct: 243 RLNEPVDKWDTPLTSLLFYK 262


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 19/86 (22%), Positives = 32/86 (37%)
 Frame = +3

Query: 387 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKE 566
           L  AA  G+ +A    +      A  A   G+    V   ++ +  P    A       E
Sbjct: 173 LTAAAALGDCQAQNDTSNHVHSIAKWAQDAGLSTGFVTTTEVTNASPAGIYAHTANRNWE 232

Query: 567 VSSYIKKIGYNPATVAFVPISGWHGD 644
            +  I+K G++PA    +     HG+
Sbjct: 233 YNGAIEKDGFDPAVCQDIASQLIHGE 258


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 279 WKFETSKYYVTIIDAPG 329
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,896
Number of Sequences: 2352
Number of extensions: 16214
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)