Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0051
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55375-6|AAC69046.2| 431|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 31 0.53
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.53
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.53
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.53
U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna synt... 30 1.2
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 3.7
AC006627-5|AAO38662.1| 529|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical pr... 28 4.9
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical ... 28 4.9
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 6.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 8.6
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical ... 27 8.6
>U55375-6|AAC69046.2| 431|Caenorhabditis elegans Hypothetical
protein K03E6.7 protein.
Length = 431
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = +2
Query: 299 DDNGDTELDPR----IQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTR 466
+++G L+ R I ELEKLN +TD INK+E++LD + F + S +L+ L++
Sbjct: 24 EEDGHPPLETRHLNMIHEELEKLNISTDVINKMEVQLDLARADFRETQVQWSEKLKELSK 83
Query: 467 RLGTCVDKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKETVTLAEQ 622
+ + + K+RP+Y+ + + R E QKAA +F+RA+ + AK+ V+L ++
Sbjct: 84 QYSSQIAKARPFYELKIKERSLREESQKAAERFERATSILGIAKQQVSLTQE 135
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +2
Query: 308 GDTELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVD 487
GD +L I+ +LE LN ATD+IN E++L+ K F ++ + + ++L +
Sbjct: 4 GDDQLIS-IRKQLENLNNATDDINSYEMKLETVKKQFCETQLMFNKEMLGIPKKLAKHIS 62
Query: 488 KSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKETVTLAEQRFVSKQ 640
KSR ++D + R Q+AA QF+R A+E V + + Q
Sbjct: 63 KSRQFFDLKSRESEIRRCVQQAAAQFERQKTSVEMAREQVQILHNSLNNNQ 113
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 269 MEESSFTIPADDNGDTELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSR 445
M+E S + + + E D R+Q E+EK+ ++E+ L+ +L+ + + + + ET++
Sbjct: 76 MQERSIVLEENSRQNEERD-RLQKEIEKMKEDSEEVAALKQKLENTRRLLKVNMEETAQ 133
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.5 bits (68), Expect = 0.53
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 263 SAMEESSFTIPADDNGDTELDPR--IQVELEKLNAATDEINKLELELDESMKTFHLLLNE 436
S + E+S T + G +E + + V+ EK TDE KLE E+ T E
Sbjct: 9326 STISETSETSAVESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLE 9385
Query: 437 TSRRLQALTRRLGTCVDKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKE 601
+L+ K + A +A A + E +K A Q +A+E A K+
Sbjct: 9386 AEAKLKRAAEEDAAKKQKEKT-EAASKKAAAEKLELEKQA-QINKAAEADAVKKQ 9438
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.53
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 263 SAMEESSFTIPADDNGDTELDPR--IQVELEKLNAATDEINKLELELDESMKTFHLLLNE 436
S + E+S T + G +E + + V+ EK TDE KLE E+ T E
Sbjct: 9346 STISETSETSAVESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLE 9405
Query: 437 TSRRLQALTRRLGTCVDKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKE 601
+L+ K + A +A A + E +K A Q +A+E A K+
Sbjct: 9406 AEAKLKRAAEEDAAKKQKEKT-EAASKKAAAEKLELEKQA-QINKAAEADAVKKQ 9458
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.53
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 263 SAMEESSFTIPADDNGDTELDPR--IQVELEKLNAATDEINKLELELDESMKTFHLLLNE 436
S + E+S T + G +E + + V+ EK TDE KLE E+ T E
Sbjct: 9346 STISETSETSAVESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLE 9405
Query: 437 TSRRLQALTRRLGTCVDKSRPYYDALGQAVAARSECQKAAVQFQRASELHAAAKE 601
+L+ K + A +A A + E +K A Q +A+E A K+
Sbjct: 9406 AEAKLKRAAEEDAAKKQKEKT-EAASKKAAAEKLELEKQA-QINKAAEADAVKKQ 9458
>U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna
synthetase protein 1 protein.
Length = 918
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDKSRPYY 505
QV +EK+ A + +LE+ +E +K HL + S ++ R+G +D ++ YY
Sbjct: 51 QVVVEKILAKNGK-RRLEMTREEFVKECHLWGEKCSSEIRQQLTRMGASLDWTQSYY 106
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 329 RIQVELEKLNAATDEINKLELELDESMKTFHLLLNETSRRLQALTRRLGTCVDK--SRPY 502
R++ + KLN A DE+ K++ + + K E L+A+T + D+ S
Sbjct: 2791 RLKGGVSKLNEARDEVAKMQKKAGKKSKLLAEKQAEADEALKAITESMSGAEDQKLSMEQ 2850
Query: 503 YDALGQAVAARSECQKAAVQFQ 568
A + R E QKA + Q
Sbjct: 2851 LKAATEKENVRIEEQKAKIDEQ 2872
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 236 RLGGFAVIGSAMEESSFTIP----ADDNGDTELDPRIQVELEKLNAATDEINKLELELDE 403
R+G + + S+F IP D + EL P++ E E+ +E+N E D+
Sbjct: 1212 RIGFLLQARKSADISAFDIPHEYHEDLGNEAELIPKLSREFEEWTVKLNEMNSTATEKDD 1271
Query: 404 SMKTFHLLLNETSRRLQALTRR 469
S + LN + + L R+
Sbjct: 1272 SAR-MREQLNHANETMAELKRK 1292
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 236 RLGGFAVIGSAMEESSFTIP----ADDNGDTELDPRIQVELEKLNAATDEINKLELELDE 403
R+G + + S+F IP D + EL P++ E E+ +E+N E D+
Sbjct: 1212 RIGFLLQARKSADISAFDIPHEYHEDLGNEAELIPKLSREFEEWTVKLNEMNSTATEKDD 1271
Query: 404 SMKTFHLLLNETSRRLQALTRR 469
S + LN + + L R+
Sbjct: 1272 SAR-MREQLNHANETMAELKRK 1292
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 236 RLGGFAVIGSAMEESSFTIP----ADDNGDTELDPRIQVELEKLNAATDEINKLELELDE 403
R+G + + S+F IP D + EL P++ E E+ +E+N E D+
Sbjct: 1212 RIGFLLQARKSADISAFDIPHEYHEDLGNEAELIPKLSREFEEWTVKLNEMNSTATEKDD 1271
Query: 404 SMKTFHLLLNETSRRLQALTRR 469
S + LN + + L R+
Sbjct: 1272 SAR-MREQLNHANETMAELKRK 1292
>AC006627-5|AAO38662.1| 529|Caenorhabditis elegans Hypothetical
protein E01A2.2b protein.
Length = 529
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 251 AVIGSAMEESSFT-IPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
AV+ +E+ S I D+NG+ P+ + E+++ + AT+E+ + +E
Sbjct: 19 AVLAQKLEDESLADIKKDENGNGTEQPKEEPEVKQESGATEELEEGAIE 67
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 251 AVIGSAMEESSFT-IPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
AV+ +E+ S I D+NG+ P+ + E+++ + AT+E+ + +E
Sbjct: 202 AVLAQKLEDESLADIKKDENGNGTEQPKEEPEVKQESGATEELEEGAIE 250
>Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical
protein R10D12.13c protein.
Length = 226
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 290 IPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
+P ++ GD E +++ E+E + + ++K+E E
Sbjct: 129 VPEEEEGDEESTEKVEDEIETMRKEMERLSKIEAE 163
>Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical
protein R10D12.13b protein.
Length = 270
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 290 IPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
+P ++ GD E +++ E+E + + ++K+E E
Sbjct: 173 VPEEEEGDEESTEKVEDEIETMRKEMERLSKIEAE 207
>Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical
protein R10D12.13a protein.
Length = 268
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 290 IPADDNGDTELDPRIQVELEKLNAATDEINKLELE 394
+P ++ GD E +++ E+E + + ++K+E E
Sbjct: 171 VPEEEEGDEESTEKVEDEIETMRKEMERLSKIEAE 205
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELE-LDESMK 412
Q ELEKLNAA E ++ELE LD K
Sbjct: 513 QKELEKLNAAKKEEERMELEKLDAERK 539
>AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical
protein F42G8.9 protein.
Length = 386
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 305 NGDTELDPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNE 436
N +++PR+ V L+KLN E K+E E D K F+ +++
Sbjct: 276 NSMEKIEPRVSVSLDKLN----ENGKVETEKDLKKKNFNFSVHK 315
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 3091 QDELDKLNNANDAIKRLGDALDDAEKT 3117
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 3994 QDELDKLNNANDAIKRLGDALDDAEKT 4020
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 4948 QDELDKLNNANDAIKRLGDALDDAEKT 4974
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 5851 QDELDKLNNANDAIKRLGDALDDAEKT 5877
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 6754 QDELDKLNNANDAIKRLGDALDDAEKT 6780
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 335 QVELEKLNAATDEINKLELELDESMKT 415
Q EL+KLN A D I +L LD++ KT
Sbjct: 7657 QDELDKLNNANDAIKRLGDALDDAEKT 7683
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 418 PSTAERDVPPPPGTHEETRH 477
PS+ E D PPP +H RH
Sbjct: 319 PSSVEADTPPPIPSHPPARH 338
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 269 MEESSFTIPADDNGDTEL---DPRIQVELEKLNAATDEINKLELELDESMKTFHLLLNET 439
+E ++ + G EL +++ ++ +L A D NKL ++ +SMK L +T
Sbjct: 1604 IESMQVSLETESRGRAELLKTKKKLEGDVNELEIALDHSNKLNVDGQKSMKK----LQDT 1659
Query: 440 SRRLQALTRRLGTCVDKSRPYYD-ALGQAVAARSECQKAAVQFQRASELHAAAK 598
R LQ + +SR + + A ++ + E + A+ ++++ A+
Sbjct: 1660 IRELQYQVEEEQRSLSESRDHANLAERRSQVLQQEKEDLAIIYEQSERTRRQAE 1713
>AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical
protein T11F1.6 protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 109 LCFFYFKPFLKFCCEFKF 162
L FY KP KFC +FKF
Sbjct: 98 LSVFYEKPGCKFCTDFKF 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,256,806
Number of Sequences: 27780
Number of extensions: 255120
Number of successful extensions: 865
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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