Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0049
(517 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 1.4
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 5.7
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 5.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.7
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 57 SVSDTPSLKDLPKVATDLKS 116
SVS PS+K + K ATD S
Sbjct: 156 SVSCVPSVKHVAKCATDFSS 175
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 105 DLKSQLEGFNTSCLRDVDTNEKIV 176
+LKS L + C++++ T ++I+
Sbjct: 21 ELKSGLHTVQSVCMKEIGTAQQII 44
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
R YRE E RD E S + R EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,614
Number of Sequences: 438
Number of extensions: 2843
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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