Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0046
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein. 114 2e-25
BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine methyl... 114 2e-25
AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransfera... 114 2e-25
AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein. 114 2e-25
BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase... 30 5.0
AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine ... 30 5.0
AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein. 30 5.0
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 29 8.7
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 29 8.7
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 29 8.7
AJ567755-1|CAD99005.1| 162|Homo sapiens KI67 Antigen protein. 29 8.7
>CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein.
Length = 637
Score = 114 bits (274), Expect = 2e-25
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Frame = +1
Query: 58 YSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVLSPQDWTSRIVAKLSPYINVDSPSA 228
+ F+ P+ HPRF+R Q + G TRSD++LS +DW + IV KLSP+I DS
Sbjct: 38 FDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVE 97
Query: 229 TVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPM 408
+R+ E + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP+
Sbjct: 98 KIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPL 157
Query: 409 LCSRTYXXXXXXXXXXKAWNE------PWYWWSKFHERLDWDKRVGVVLEL 543
+ E W WW F D+ KR+ V LE+
Sbjct: 158 VAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEI 208
>BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine
methyltransferase 5 protein.
Length = 637
Score = 114 bits (274), Expect = 2e-25
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Frame = +1
Query: 58 YSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVLSPQDWTSRIVAKLSPYINVDSPSA 228
+ F+ P+ HPRF+R Q + G TRSD++LS +DW + IV KLSP+I DS
Sbjct: 38 FDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVE 97
Query: 229 TVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPM 408
+R+ E + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP+
Sbjct: 98 KIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPL 157
Query: 409 LCSRTYXXXXXXXXXXKAWNE------PWYWWSKFHERLDWDKRVGVVLEL 543
+ E W WW F D+ KR+ V LE+
Sbjct: 158 VAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEI 208
>AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransferase
protein.
Length = 637
Score = 114 bits (274), Expect = 2e-25
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Frame = +1
Query: 58 YSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVLSPQDWTSRIVAKLSPYINVDSPSA 228
+ F+ P+ HPRF+R Q + G TRSD++LS +DW + IV KLSP+I DS
Sbjct: 38 FDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVE 97
Query: 229 TVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPM 408
+R+ E + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP+
Sbjct: 98 KIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPL 157
Query: 409 LCSRTYXXXXXXXXXXKAWNE------PWYWWSKFHERLDWDKRVGVVLEL 543
+ E W WW F D+ KR+ V LE+
Sbjct: 158 VAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEI 208
>AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein.
Length = 637
Score = 114 bits (274), Expect = 2e-25
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Frame = +1
Query: 58 YSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVLSPQDWTSRIVAKLSPYINVDSPSA 228
+ F+ P+ HPRF+R Q + G TRSD++LS +DW + IV KLSP+I DS
Sbjct: 38 FDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDSKVE 97
Query: 229 TVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPM 408
+R+ E + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP+
Sbjct: 98 KIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPL 157
Query: 409 LCSRTYXXXXXXXXXXKAWNE------PWYWWSKFHERLDWDKRVGVVLEL 543
+ E W WW F D+ KR+ V LE+
Sbjct: 158 VAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEI 208
>BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase
36, fused homolog (Drosophila) protein.
Length = 1315
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 271 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 369
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 494 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 526
>AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine
kinase protein.
Length = 1315
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 271 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 369
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 494 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 526
>AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein.
Length = 1311
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 271 SYCRGLGVPAIMISI--HGRESNNLARILQTYYET 369
S+CR G+P +++S+ H +ESN+L + Q++Y T
Sbjct: 511 SFCREAGLPGLLLSLLRHSQESNSLQQ--QSWYGT 543
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 97 RRQSTNAGKNGGFTRSDMVLSPQDWTSR 180
RR+S N GK+ GF D L+P+ ++R
Sbjct: 371 RRESVNLGKSEGFKAGDKTLTPRKLSTR 398
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 97 RRQSTNAGKNGGFTRSDMVLSPQDWTSR 180
RR+S N GK+ GF D L+P+ ++R
Sbjct: 371 RRESVNLGKSEGFKAGDKTLTPRKLSTR 398
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 97 RRQSTNAGKNGGFTRSDMVLSPQDWTSR 180
RR+S N GK+ GF D L+P+ ++R
Sbjct: 371 RRESVNLGKSEGFKAGDKTLTPRKLSTR 398
>AJ567755-1|CAD99005.1| 162|Homo sapiens KI67 Antigen protein.
Length = 162
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 97 RRQSTNAGKNGGFTRSDMVLSPQDWTSR 180
RR+S N GK+ GF D L+P+ ++R
Sbjct: 40 RRESVNLGKSEGFKAGDKTLTPRKLSTR 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,633,676
Number of Sequences: 237096
Number of extensions: 1761496
Number of successful extensions: 3077
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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