Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0046
(569 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ002740-1|CAA05712.1| 609|Drosophila melanogaster capsuleen pr... 55 6e-08
AY122153-1|AAM52665.1| 610|Drosophila melanogaster LD07634p pro... 53 3e-07
AF167574-1|AAF04504.1| 610|Drosophila melanogaster putative pro... 53 3e-07
AE013599-2232|AAM68510.1| 610|Drosophila melanogaster CG3730-PA... 53 3e-07
AE013599-2233|AAF58030.1| 605|Drosophila melanogaster CG3730-PB... 52 5e-07
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent... 32 0.63
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P... 32 0.63
>AJ002740-1|CAA05712.1| 609|Drosophila melanogaster capsuleen
protein.
Length = 609
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = +1
Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
+LS DW S+++ +S +NVDSP+A +R+ ++ ++++ L V +M+ + G E
Sbjct: 54 ILSGSDWNSKVIFTMSD-VNVDSPNAKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112
Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
+ NLA I+ + PS W P L + + +A N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171
Query: 490 KFHERLDWDKRVGVVLEL 543
+V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189
>AY122153-1|AAM52665.1| 610|Drosophila melanogaster LD07634p
protein.
Length = 610
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +1
Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
+LS DW S+++ +S +NVDSP+ +R+ ++ ++++ L V +M+ + G E
Sbjct: 54 ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112
Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
+ NLA I+ + PS W P L + + +A N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171
Query: 490 KFHERLDWDKRVGVVLEL 543
+V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189
>AF167574-1|AAF04504.1| 610|Drosophila melanogaster putative
protein methyltransferaseJBP1 protein.
Length = 610
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +1
Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
+LS DW S+++ +S +NVDSP+ +R+ ++ ++++ L V +M+ + G E
Sbjct: 54 ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112
Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
+ NLA I+ + PS W P L + + +A N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171
Query: 490 KFHERLDWDKRVGVVLEL 543
+V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189
>AE013599-2232|AAM68510.1| 610|Drosophila melanogaster CG3730-PA,
isoform A protein.
Length = 610
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +1
Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
+LS DW S+++ +S +NVDSP+ +R+ ++ ++++ L V +M+ + G E
Sbjct: 54 ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112
Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
+ NLA I+ + PS W P L + + +A N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171
Query: 490 KFHERLDWDKRVGVVLEL 543
+V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189
>AE013599-2233|AAF58030.1| 605|Drosophila melanogaster CG3730-PB,
isoform B protein.
Length = 605
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
+LS DW S+++ +S +NVDSP+ +R+ ++ ++++ L V +M+ + G E
Sbjct: 54 ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112
Query: 328 SNNLARILQTYYETSHHPSLIWACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWSKFHER 504
+ NLA I+ + + + P L + + +A N+PW WW+
Sbjct: 113 NENLASIVLAKTKGNWFIQ-VPITNPELATFEHRKDATAEEVAEAESNDPWNWWNNLRMV 171
Query: 505 LDWDKRVGVVLEL 543
+V VV+EL
Sbjct: 172 TKHSTKVKVVIEL 184
>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
centrosomal protein protein.
Length = 2726
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 232 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 339
V+++ +DYLN++++ CR LG + I+ ES L
Sbjct: 665 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 700
>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
isoform B protein.
Length = 2897
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 232 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 339
V+++ +DYLN++++ CR LG + I+ ES L
Sbjct: 836 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 871
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,937,966
Number of Sequences: 53049
Number of extensions: 550967
Number of successful extensions: 1204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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