Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0045
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 2.8
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 2.8
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 2.8
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 2.8
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.7
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical p... 28 6.5
Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical p... 28 6.5
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 28 6.5
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 28 6.5
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 28 6.5
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 28 6.5
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 28 6.5
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 28 6.5
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 28 6.5
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 28 6.5
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 28 6.5
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 28 6.5
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 28 6.5
AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical ... 28 6.5
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 28 6.5
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 28 6.5
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 28 6.5
U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical
protein C44H9.2 protein.
Length = 755
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 SSPTTPIKPQS*QSLLSLEKYHAMDQFKSWRL-TIITTPSLTTANTMTRKSLIKCVVWIL 395
S P + P S ++++ + F W L T+ ++++++ V+
Sbjct: 565 SEPNWNLLPDSSRTVIDMPVL-MKHYFVGWALGTVFGIEQTKHLTDEMKRAIVRKVIQDF 623
Query: 396 SRNKKLEGDAKTAVDNFINEHSKEI 470
+ +KL+G+AKT +N H ++I
Sbjct: 624 TTPEKLQGEAKTIYENMETMHKEQI 648
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 14 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 148
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 14 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 148
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 14 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 148
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 14 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 148
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 466 SLECSLMKLSTAVLASPSSFLFLERIQTTHLMRLFLVIVFAVVSD 332
S+ C + K LA+P F+++ +THL +L + ++ D
Sbjct: 1367 SIRCGINKFGQMELATPGQLHFVQQSTSTHLDKLTFALSNKILKD 1411
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 466 SLECSLMKLSTAVLASPSSFLFLERIQTTHLMRLFLVIVFAVVSD 332
S+ C + K LA+P F+++ +THL +L + ++ D
Sbjct: 1367 SIRCGINKFGQMELATPGQLHFVQQSTSTHLDKLTFALSNKILKD 1411
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +3
Query: 261 LLSLEKYHAMDQFKSWRLTIITTPSLTTANTMTRKSLIKCVVWILSRNKKLEGDAKTAVD 440
L +EK A ++ + T TTP+ TT T T ++ + K++ + A+
Sbjct: 751 LKKIEKVEATSTTETEKPTTETTPATTTVTTTTEETTTP-----KKQEVKMKHMDEKALM 805
Query: 441 NFINEHSKEIDSSKLVHTDFSE---EACKFTSSSVIT 542
INE S++++ S+ V + +E EA T S T
Sbjct: 806 EKINEASEKLEKSQEVTEEVTEATTEAITTTEESTTT 842
>Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 164 VKNVHIIDGVKKYIEGTAK---LTDYANKA 244
VK H D V++YI+GTA LTDY A
Sbjct: 306 VKIGHASDSVRQYIDGTATSGLLTDYTESA 335
>Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 164 VKNVHIIDGVKKYIEGTAK---LTDYANKA 244
VK H D V++YI+GTA LTDY A
Sbjct: 306 VKIGHASDSVRQYIDGTATSGLLTDYTESA 335
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 174 CISSTASRSI*KGRPSSPTTPIKPQS*QSLLSLEKYHA 287
C SS+ R +SP+TP+ P+ SL SL +H+
Sbjct: 31 CASSSIDRKDQASPMASPSTPLYPKHSDSLHSLSGHHS 68
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 174 CISSTASRSI*KGRPSSPTTPIKPQS*QSLLSLEKYHA 287
C SS+ R +SP+TP+ P+ SL SL +H+
Sbjct: 31 CASSSIDRKDQASPMASPSTPLYPKHSDSLHSLSGHHS 68
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 174 CISSTASRSI*KGRPSSPTTPIKPQS*QSLLSLEKYHA 287
C SS+ R +SP+TP+ P+ SL SL +H+
Sbjct: 31 CASSSIDRKDQASPMASPSTPLYPKHSDSLHSLSGHHS 68
>AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical
protein Y57A10A.4 protein.
Length = 629
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 390 ILSRNKKLEGDAKTAVDNFINEHSKEIDSSKLVHTDFSEEACKFTS 527
I R + + G A D+F+ K+I LVH D + CKFTS
Sbjct: 68 IEERVRVIFGFAAVVSDDFL----KQIQREGLVHLDKKKRICKFTS 109
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 ASGMKSRNFPTNLRRTANALQLNTNWKVTW*RSRTCIS----STASRSI*KGRPSSPTTP 236
+SG SR T N++ T +RT S S ASR R SPTTP
Sbjct: 507 SSGTSSRQLKTTPNGNVAYRTRNSSGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTP 566
Query: 237 IKPQS 251
IKP S
Sbjct: 567 IKPMS 571
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 174 CISSTASRSI*KGRPSSPTTPIKPQS*QSLLSLEKYHA 287
C SS+ R +SP+TP+ P+ SL SL +H+
Sbjct: 73 CASSSIDRKDQASPMASPSTPLYPKHSDSLHSLSGHHS 110
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 174 CISSTASRSI*KGRPSSPTTPIKPQS*QSLLSLEKYHA 287
C SS+ R +SP+TP+ P+ SL SL +H+
Sbjct: 31 CASSSIDRKDQASPMASPSTPLYPKHSDSLHSLSGHHS 68
>U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical
protein C56C10.6 protein.
Length = 422
Score = 27.5 bits (58), Expect = 8.6
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +3
Query: 258 SLLSLEKYHAMDQFKSWRLTIITTPSLTTANTMTRKS---LIKCVVWILSRNKKL----- 413
S++S K+ D F W + I TTPS +T + KS L K V SR K L
Sbjct: 292 SVMSKGKFAWNDPF-DWEMPISTTPSKSTPSKSVTKSPAQLSKETVKKASREKTLSKEKT 350
Query: 414 -EGDAKTAVDNFINEHSKE 467
+ D KTA I + KE
Sbjct: 351 SKEDIKTARKTSIEKDVKE 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,365
Number of Sequences: 27780
Number of extensions: 269816
Number of successful extensions: 1006
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -