Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0040
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.29 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   2.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   2.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.1  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   8.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.29
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 130 AYTQQHRTIHAKHKHNYTHTQFIHSFKRHKLNTQVLFIYCEH 5
           +Y QQ    H++H H++ H    HS ++H  + +   +  EH
Sbjct: 171 SYHQQQHPGHSQHHHHHHHHHPHHSQQQHSASPRCYPMPPEH 212


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 228 QTHSPSLHHSRTHP 187
           Q H PS+HH   HP
Sbjct: 132 QQHHPSVHHPAHHP 145


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 210 LHHSRTHPKPFHLRFTHDGITTHNSFPLI 124
           L+H+ T+PK   L   +DG T  +  P I
Sbjct: 546 LNHACTNPKLSSLILINDGTTADSKVPAI 574


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 245 RRRRAVTRPGSRACSTLTRETSMLPMRSVTNNFLCPTR 358
           RRRRA+ R   R C    R       R V +    PTR
Sbjct: 493 RRRRAIARARRRRCRPRARRNPPATTRPVRHR---PTR 527


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 146 VVIPSCVNLRWKGFGCV 196
           VV+P    LR KG+G V
Sbjct: 306 VVVPRLFRLRTKGYGVV 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,544
Number of Sequences: 2352
Number of extensions: 6006
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)