Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0039
         (395 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.33 
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   0.76 
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    22   7.1  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.33
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 195 CCHSYCSSMANVPTQSSELA 254
           CCH +C+     PTQS  LA
Sbjct: 201 CCHLFCAGGCTGPTQSDCLA 220


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.4 bits (53), Expect = 0.76
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 323 F*DNGFHFFPFLAAGLSSPFLGTCQFRGLRRYIGHGGTVRMAASRN 186
           F D G  F P L  G +   + +  +RGLR  I H    +  + ++
Sbjct: 277 FHDVGLLFLPLLTMGFAYSMIVSKLWRGLRHEIKHSSLYQQTSRQH 322


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 26  GFLYIYTNP 52
           GFLY++TNP
Sbjct: 84  GFLYMFTNP 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,816
Number of Sequences: 2352
Number of extensions: 6821
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)