Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0038
         (337 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   189   9e-49
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   189   9e-49
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   0.86 
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   0.86 
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    29   2.0  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    29   2.0  
BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p pro...    27   4.6  
AY052113-1|AAK93537.1|  689|Drosophila melanogaster SD06390p pro...    27   4.6  
AY051603-1|AAK93027.1|  416|Drosophila melanogaster GH24271p pro...    27   4.6  
AF405243-1|AAK94940.1|  416|Drosophila melanogaster flavin-conta...    27   4.6  
AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA...    27   4.6  
AE014134-1735|AAO41181.1|  689|Drosophila melanogaster CG5853-PA...    27   4.6  
AE013599-3753|AAF47118.1|  416|Drosophila melanogaster CG3006-PA...    27   4.6  
AF181639-1|AAD55425.1| 1532|Drosophila melanogaster BcDNA.GH0935...    27   6.0  
AE014298-1422|AAF46565.3| 1532|Drosophila melanogaster CG2967-PA...    27   6.0  
AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA ...    27   6.0  
AY119585-1|AAM50239.1|  326|Drosophila melanogaster LD14730p pro...    27   8.0  
AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA...    27   8.0  
AE014134-3299|AAF53930.2|  326|Drosophila melanogaster CG31673-P...    27   8.0  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  189 bits (460), Expect = 9e-49
 Identities = 87/112 (77%), Positives = 100/112 (89%)
 Frame = +2

Query: 2   MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLD 112


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  189 bits (460), Expect = 9e-49
 Identities = 87/112 (77%), Positives = 100/112 (89%)
 Frame = +2

Query: 2   MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLD 112


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 0.86
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 155 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 244
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 0.86
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 155 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 244
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 23/98 (23%), Positives = 42/98 (42%)
 Frame = +2

Query: 14   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 193
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 194  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 307
               GK+    R   V      Q ++ + A A  G  PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
            protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 23/98 (23%), Positives = 42/98 (42%)
 Frame = +2

Query: 14   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 193
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 194  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 307
               GK+    R   V      Q ++ + A A  G  PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809


>BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p protein.
          Length = 1316

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 290  HMLLHHWPFLFESSQCIQQTFYDTPASL-C--QPVGLCSV 180
            H+L + WP +FE+S  + Q F D+   L C   P+  C++
Sbjct: 1266 HLLNYVWPNIFETSPHLVQAFMDSVDGLGCPWDPLRSCNI 1305


>AY052113-1|AAK93537.1|  689|Drosophila melanogaster SD06390p
           protein.
          Length = 689

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 250 LNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRH 140
           L+ YN LF I +HH    +   V T+ ++  +    H
Sbjct: 464 LDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEH 500


>AY051603-1|AAK93027.1|  416|Drosophila melanogaster GH24271p
           protein.
          Length = 416

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
 Frame = +2

Query: 47  KRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV--MQV 220
           K+H    S++ RVL      + L +      +  +  D+V V  GHY      ++  M+ 
Sbjct: 105 KKHIKFDSYVIRVLQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMER 164

Query: 221 YRKKFVVYIERIQREKANGATAYV-GIHPS 307
           ++ +F+   +   RE   G +  V G  PS
Sbjct: 165 FKGQFLHSHDFRSREVFEGKSVLVIGAGPS 194


>AF405243-1|AAK94940.1|  416|Drosophila melanogaster
           flavin-containing monooxygenaseFMO-1 protein.
          Length = 416

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
 Frame = +2

Query: 47  KRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV--MQV 220
           K+H    S++ RVL      + L +      +  +  D+V V  GHY      ++  M+ 
Sbjct: 105 KKHIKFDSYVIRVLQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMER 164

Query: 221 YRKKFVVYIERIQREKANGATAYV-GIHPS 307
           ++ +F+   +   RE   G +  V G  PS
Sbjct: 165 FKGQFLHSHDFRSREVFEGKSVLVIGAGPS 194


>AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA
           protein.
          Length = 1052

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 107 KELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKA 271
           KELR+K    +  +R   E  +  G  +GQQ+    Q    K VV ++  Q+E A
Sbjct: 69  KELRRKTGSDAPSVRSRSETDL--GQVRGQQLMPHQQHSEAKVVVVLDSKQKEVA 121


>AE014134-1735|AAO41181.1|  689|Drosophila melanogaster CG5853-PA
           protein.
          Length = 689

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 250 LNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRH 140
           L+ YN LF I +HH    +   V T+ ++  +    H
Sbjct: 464 LDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEH 500


>AE013599-3753|AAF47118.1|  416|Drosophila melanogaster CG3006-PA
           protein.
          Length = 416

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
 Frame = +2

Query: 47  KRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV--MQV 220
           K+H    S++ RVL      + L +      +  +  D+V V  GHY      ++  M+ 
Sbjct: 105 KKHIKFDSYVIRVLQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMER 164

Query: 221 YRKKFVVYIERIQREKANGATAYV-GIHPS 307
           ++ +F+   +   RE   G +  V G  PS
Sbjct: 165 FKGQFLHSHDFRSREVFEGKSVLVIGAGPS 194


>AF181639-1|AAD55425.1| 1532|Drosophila melanogaster BcDNA.GH09358
           protein.
          Length = 1532

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 254 SSQCIQQTFYDTPASLCQPVGLCSVHV 174
           S+ C+ QT+Y     +  P  LCS H+
Sbjct: 283 SNDCVAQTWYRFLRMIGNPTALCSPHI 309


>AE014298-1422|AAF46565.3| 1532|Drosophila melanogaster CG2967-PA
           protein.
          Length = 1532

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 254 SSQCIQQTFYDTPASLCQPVGLCSVHV 174
           S+ C+ QT+Y     +  P  LCS H+
Sbjct: 283 SNDCVAQTWYRFLRMIGNPTALCSPHI 309


>AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA
            protein.
          Length = 1340

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 290  HMLLHHWPFLFESSQCIQQTFYDTPASLCQPVG 192
            H+L + WP +FE+S  + Q F D+   L   +G
Sbjct: 1246 HLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLG 1278


>AY119585-1|AAM50239.1|  326|Drosophila melanogaster LD14730p
           protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +2

Query: 83  VLMSSPLSKELRQKFNVKSMPIRKDDE--VQVVRG 181
           +++++PL+ E R+KFN K+  + K     V V RG
Sbjct: 211 LVVAAPLTNETREKFNGKAFNLMKRSSVFVNVARG 245


>AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA
           protein.
          Length = 1060

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 265 FSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFY 131
           FS+    +  +LF +H H+ +  LAF+V  Y    I+       Y
Sbjct: 809 FSIARFEMLRRLFLVHGHYNSQRLAFLVLFYCYKNIIITGCMALY 853


>AE014134-3299|AAF53930.2|  326|Drosophila melanogaster CG31673-PA
           protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +2

Query: 83  VLMSSPLSKELRQKFNVKSMPIRKDDE--VQVVRG 181
           +++++PL+ E R+KFN K+  + K     V V RG
Sbjct: 211 LVVAAPLTNETREKFNGKAFNLMKRSSVFVNVARG 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,486,154
Number of Sequences: 53049
Number of extensions: 322266
Number of successful extensions: 852
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)