Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0035
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 321 3e-88
03_01_0547 + 4093196-4093657,4094267-4095148 321 3e-88
03_01_0544 + 4082528-4082989,4083585-4084466 321 3e-88
03_01_0543 + 4076981-4077442,4078145-4079026 321 3e-88
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 87 1e-17
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 81 6e-16
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 81 6e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 75 7e-14
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 73 2e-13
02_04_0462 + 23131433-23132836 64 9e-11
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 63 2e-10
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 31 0.80
04_04_0511 - 25800371-25800454,25800563-25800629,25800903-258010... 29 2.4
11_06_0516 + 24502645-24504507 29 3.2
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 29 4.2
06_03_1165 - 28106604-28106915 28 5.6
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 5.6
07_03_0634 + 20125242-20125688 27 9.8
06_01_0113 + 886899-886906,887029-887107,887390-887458,887547-88... 27 9.8
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 27 9.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 321 bits (789), Expect = 3e-88
Identities = 145/194 (74%), Positives = 171/194 (88%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
LPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDN
Sbjct: 236 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDN 295
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
VGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLDCHT+H
Sbjct: 296 VGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSH 355
Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
IA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct: 356 IAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVR 415
Query: 544 DMRQTVAVGVIKAV 585
DMRQTVAVGVIK V
Sbjct: 416 DMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 321 bits (789), Expect = 3e-88
Identities = 145/194 (74%), Positives = 171/194 (88%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
LPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDN
Sbjct: 236 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDN 295
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
VGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLDCHT+H
Sbjct: 296 VGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSH 355
Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
IA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct: 356 IAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVR 415
Query: 544 DMRQTVAVGVIKAV 585
DMRQTVAVGVIK V
Sbjct: 416 DMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 321 bits (789), Expect = 3e-88
Identities = 145/194 (74%), Positives = 171/194 (88%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
LPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDN
Sbjct: 236 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDN 295
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
VGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLDCHT+H
Sbjct: 296 VGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSH 355
Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
IA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct: 356 IAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVR 415
Query: 544 DMRQTVAVGVIKAV 585
DMRQTVAVGVIK V
Sbjct: 416 DMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 321 bits (789), Expect = 3e-88
Identities = 145/194 (74%), Positives = 171/194 (88%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
LPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDN
Sbjct: 236 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDN 295
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
VGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLDCHT+H
Sbjct: 296 VGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSH 355
Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
IA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct: 356 IAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVR 415
Query: 544 DMRQTVAVGVIKAV 585
DMRQTVAVGVIK V
Sbjct: 416 DMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 87.0 bits (206), Expect = 1e-17
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
+P+ D YK +GTV +G++E+G ++ G ++ P +V + + ++ A P +N
Sbjct: 230 MPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAEN 287
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN--HPGQISNGYTPVLDCHT 357
V + + +++ G+V S NP +F AQ+ +L + GY VL H+
Sbjct: 288 VRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHS 346
Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSKPLCVESFQEF 516
C+ ++ E++D + K + K +K+G + + + +C+E+F +F
Sbjct: 347 VVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDF 406
Query: 517 PPLGRFAVR 543
P LGRF +R
Sbjct: 407 PQLGRFTLR 415
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 81.4 bits (192), Expect = 6e-16
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 180
LP+ DV K G G++ETG ++ G+ V+ +P VKS+E + A GD
Sbjct: 482 LPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGD 541
Query: 181 NVGFNVKNVSVKELRRGYVAGDSKNNP--PKGAADFTA-QVIVLNHPGQISNGYTPVLDC 351
NV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 542 NVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHI 597
Query: 352 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 531
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR
Sbjct: 598 HHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGR 656
Query: 532 FAVRDMRQTVAVGVI 576
+R T+AVGV+
Sbjct: 657 AFLRSSGSTIAVGVV 671
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 81.4 bits (192), Expect = 6e-16
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 180
LP+ DV K G G++ETG ++ G+ V+ +P VKS+E + A GD
Sbjct: 482 LPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGD 541
Query: 181 NVGFNVKNVSVKELRRGYVAGDSKNNP--PKGAADFTA-QVIVLNHPGQISNGYTPVLDC 351
NV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 542 NVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHI 597
Query: 352 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 531
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR
Sbjct: 598 HHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGR 656
Query: 532 FAVRDMRQTVAVGVI 576
+R T+AVGV+
Sbjct: 657 AFLRSSGSTIAVGVV 671
>04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 74.5 bits (175), Expect = 7e-14
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVG-RVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 180
LP+ DV+ +G V +G +VE G + G+ ++ P VK++E + + A GD
Sbjct: 466 LPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGD 525
Query: 181 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTA 360
NV ++ + + G V + P A+ +++VL+ I G
Sbjct: 526 NVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITVPILVGL--------- 575
Query: 361 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAV 540
++ +I ++++TGK+++ P+ + S A++ + K +CVE F LGR +
Sbjct: 576 QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFL 635
Query: 541 RDMRQTVAVGVIKAV 585
R T+AVG++ V
Sbjct: 636 RSQGNTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
+P+ D YK +GTV +G++E+G + G ++ P +V SV + ++ A PG+N
Sbjct: 185 MPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGEN 242
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN--HPGQISNGYTPVLDCHT 357
V + + ++ G+V K NP ++F AQ+ +L + GY VL H+
Sbjct: 243 VRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHS 301
Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKSIK 447
C+ E+ E++D + K ++ K K
Sbjct: 302 VVEECEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 64.1 bits (149), Expect = 9e-11
Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 5/199 (2%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPG 177
L ++DV+ I G GTV GR+E G +K G V T V VEM + + +A+ G
Sbjct: 281 LAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAG 340
Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQIS---NGYTPVLD 348
DNVG ++ + ++ RG V + P D V+ + G+ S GY P
Sbjct: 341 DNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYRPQFY 400
Query: 349 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 528
T + +I D K GD + + +P+ E
Sbjct: 401 MRTTDVTGNVTKIMNDKDEEA--------KMCMPGDRVKMVVELIQPVACEQGM------ 446
Query: 529 RFAVRDMRQTVAVGVIKAV 585
RFA+R+ +TV GVI +
Sbjct: 447 RFAIREGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 63.3 bits (147), Expect = 2e-10
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Frame = +1
Query: 4 LPLQDVYKIGGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEALQEAV 171
+P++DV+ I G GTV GRVE G +K G I+ P+ + T V VEM + L
Sbjct: 270 MPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGE 329
Query: 172 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDC 351
GDNVG ++ + +++RG V K K F A++ VL +T L
Sbjct: 330 AGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTK--DEGGRHTAFLSN 385
Query: 352 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 531
++ + A++ KV G + ++ +G L+ PL P R
Sbjct: 386 YSPQFYFRTADVTGKVVLPDGVEMVMPGDNVTAG----FELISPVPL--------EPGQR 433
Query: 532 FAVRDMRQTVAVGVIKAV 585
FA+R+ +TV GV+ V
Sbjct: 434 FALREGGRTVGAGVVSKV 451
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 31.1 bits (67), Expect = 0.80
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 52 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 231
+G + + P TIV +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 232 YVAGDS---KNNPPKGAADFTAQVIVLNH 309
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>04_04_0511 -
25800371-25800454,25800563-25800629,25800903-25801000,
25801094-25801152,25801247-25801379,25801461-25801532,
25801628-25801678,25802000-25802111,25802231-25802604
Length = 349
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +1
Query: 97 VFAPANITTEVKSVEMHHEAL-QEAVPGDNVGFNV-KNVSVKELRRGYVAGDSKNNPPKG 270
+F P+ + SV +H + E + GDN ++ +N + + G V + N P G
Sbjct: 34 LFVPSGTMANLISVLVHCDTRGSEVILGDNSHIHIYENGGISTI--GGVHPKTVRNNPDG 91
Query: 271 AADFTAQVIVLNHP-GQISNGYTPVLDCHTAHIAC 372
D V+ + HP G + T ++ H C
Sbjct: 92 TMDIDKIVVAIRHPDGALYYPTTRLICLENTHANC 126
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 136 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 315
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 316 QISNG 330
+I G
Sbjct: 170 EIRRG 174
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 301 LNHPGQISNGYTPVLDCHTAHIACKFAEIKE-KVDRRTGKSTEVNPKSI 444
L+ P +ISNG TPV D ++ C+ K D + + +EV+ S+
Sbjct: 271 LHRPRRISNGTTPVFDDNSGSHLCQDVSSKSFSADDQCLQDSEVDKDSV 319
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 126 SQVCGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 242
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 626 AALVTLPPPASLKLT-ALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASP 450
A + L PA + A+ P TV + T ++ RG K +GL G KLT S
Sbjct: 266 ALIYPLVSPAVVSCDIAIAYPMPTVNPVESTPRKGRGRPRKKPVEIKGLSGIKLTEDLST 325
Query: 449 DLMDFGLTSVDLPVRR 402
L LT ++ +R
Sbjct: 326 ALSPIALTCMEPKKKR 341
>07_03_0634 + 20125242-20125688
Length = 148
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Frame = -3
Query: 635 AFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLE---GTKLT 465
A ++A T PP ++LT + L R P G WK +E GT
Sbjct: 53 AVASAAATASPPVGVQLTVTSEHSEWSILSPRKTCHPTGKVKWKGRREHFVERLVGTAHL 112
Query: 464 MAASPDLMDFGLTSVDLP 411
P+ G +V LP
Sbjct: 113 PRRRPERQPQGSGAVPLP 130
>06_01_0113 +
886899-886906,887029-887107,887390-887458,887547-887636,
887725-887863,888466-888568,888664-888716,888801-888867,
889147-889255,889499-889567,889676-889745,889833-889952,
890052-890201,890611-890873
Length = 462
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 156 SPRSCTWRQCRFQRKERVRQGIASWLCCW*LQKQPT 263
+P TW + Q +R WLC W Q++PT
Sbjct: 217 TPNQRTWAE-GLQLAASIRFQFPQWLCSWDPQRRPT 251
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 578 LMTPTATVCLMSRTAKRPRGGNSWKDST 495
LM T +VC S+ + P G W DST
Sbjct: 624 LMGKTVSVCERSKEHRVPTMGKGWSDST 651
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,421
Number of Sequences: 37544
Number of extensions: 444409
Number of successful extensions: 1459
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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