Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0035
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   1.6  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.8  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   6.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.4  

>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 104 AKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRG 6
           A  T  PG   P+S L  G V   P  YT+  G
Sbjct: 450 ATLTPSPGIGGPISPLDPGNVTPTPPAYTTLGG 482


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 449 LEMQPLSTWYLPSLYV*SP 505
           LE  PL++W LP  YV  P
Sbjct: 632 LEPVPLASWQLPPPYVTEP 650


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 96  CLCPRQHHY*SQVCGDAPRSSPRSC 170
           C CP  H Y   VCG  P    ++C
Sbjct: 22  CACPYAHPYPYDVCG--PNEEFQTC 44


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 593 LKLTALMTPTATVCLMSRTAKRPRGGNSW 507
           L L  +    A VCLM      PR   +W
Sbjct: 17  LALNTMRVERADVCLMVELHSVPRNNGNW 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,930
Number of Sequences: 2352
Number of extensions: 17110
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)