Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0033
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029141-1|ABJ17074.1| 59|Drosophila melanogaster RE25914p pro... 32 0.83
AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-P... 31 1.5
X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein. 31 1.9
X51653-1|CAA35965.1| 494|Drosophila melanogaster empty spiracle... 31 1.9
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein. 31 1.9
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me... 31 1.9
BT021310-1|AAX33458.1| 494|Drosophila melanogaster RE15812p pro... 31 1.9
AE014297-1771|AAF54999.1| 494|Drosophila melanogaster CG2988-PA... 31 1.9
BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p pro... 30 2.5
BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p pro... 30 3.4
AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-P... 30 3.4
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P... 29 4.5
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 29 5.9
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 29 5.9
BT022835-1|AAY55251.1| 132|Drosophila melanogaster IP07555p pro... 29 7.8
BT022783-1|AAY55199.1| 142|Drosophila melanogaster IP07355p pro... 29 7.8
BT022733-1|AAY55149.1| 131|Drosophila melanogaster IP07255p pro... 29 7.8
BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p pro... 29 7.8
AF273708-1|AAL35411.1| 118|Drosophila melanogaster PFTAIRE-inte... 29 7.8
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 7.8
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 7.8
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 7.8
AE014297-3819|AAF56481.1| 148|Drosophila melanogaster CG5079-PA... 29 7.8
AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA... 29 7.8
>BT029141-1|ABJ17074.1| 59|Drosophila melanogaster RE25914p
protein.
Length = 59
Score = 31.9 bits (69), Expect = 0.83
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 310 CCGCCPYTARCETDCCAC 363
CC CCP +C CC C
Sbjct: 39 CCPCCPCCCQCGECCCCC 56
>AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-PA
protein.
Length = 1354
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 610 ISSPKISTAKMSTTKMSANKMSATKIAATKMSATKMP 500
I++PK +T K STTK + K S+ K A S T+ P
Sbjct: 703 ITTPKPTTPKPSTTKTTTPKSSSAKPALPPKSTTQRP 739
>X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 218 EQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPDKEPQTPLNESRPVLLMVAQH 42
EQP +A++ +R+ A PA+ I HT PQ+ S P LL+ + H
Sbjct: 172 EQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPH 230
>X51653-1|CAA35965.1| 494|Drosophila melanogaster empty spiracles
homeotic protein protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 218 EQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPDKEPQTPLNESRPVLLMVAQH 42
EQP +A++ +R+ A PA+ I HT PQ+ S P LL+ + H
Sbjct: 169 EQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPH 227
>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
Length = 2483
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 236 EQHAPMEQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPD--KEPQTPLNESRPV 63
E+ +P+E+ V+ E+ Q PA VPA T + T +P +E + ++ RP+
Sbjct: 2402 EEQSPLEEVTVSKPGEQPAQPTIPASPVPAETSSTSSAKSTSSPSLCQEEEDAVDPERPL 2461
Query: 62 LLMVAQHDCCKLQR 21
H ++ R
Sbjct: 2462 NWPPRSHQAMRMAR 2475
>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
Length = 1938
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 236 EQHAPMEQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPD--KEPQTPLNESRPV 63
E+ +P+E+ V+ E+ Q PA VPA T + T +P +E + ++ RP+
Sbjct: 1857 EEQSPLEEVTVSKPGEQPAQPTIPASPVPAETSSTSSAKSTSSPSLCQEEEDAVDPERPL 1916
Query: 62 LLMVAQHDCCKLQR 21
H ++ R
Sbjct: 1917 NWPPRSHQAMRMAR 1930
>BT021310-1|AAX33458.1| 494|Drosophila melanogaster RE15812p
protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 218 EQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPDKEPQTPLNESRPVLLMVAQH 42
EQP +A++ +R+ A PA+ I HT PQ+ S P LL+ + H
Sbjct: 169 EQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPH 227
>AE014297-1771|AAF54999.1| 494|Drosophila melanogaster CG2988-PA
protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 218 EQPGVAIASERDVQRA*PAVRVPAIRVPTIHVRHTRAPDKEPQTPLNESRPVLLMVAQH 42
EQP +A++ +R+ A PA+ I HT PQ+ S P LL+ + H
Sbjct: 169 EQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPH 227
>BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p
protein.
Length = 270
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 307 SCCGCCPYTARCETDCCACYTGC 375
SCC CC Y C CC C + C
Sbjct: 7 SCCCCC-YCCCCTCCCCCCCSCC 28
>BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p
protein.
Length = 131
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 527 HQDVRHQDARRQDVQLQNIHRQ-DIHHQGFQHQ 432
HQ +HQ +Q +Q Q HRQ +H Q Q Q
Sbjct: 24 HQQQQHQQTHQQHLQQQYHHRQHSLHQQHLQRQ 56
>AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-PA
protein.
Length = 136
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 527 HQDVRHQDARRQDVQLQNIHRQ-DIHHQGFQHQ 432
HQ +HQ +Q +Q Q HRQ +H Q Q Q
Sbjct: 29 HQQQQHQQTHQQHLQQQYHHRQHSLHQQHLQRQ 61
>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
isoform A protein.
Length = 1473
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 530 RHQDVRHQDARRQD--VQLQNIHRQDIHHQGFQHQDVQRRGVRDWRRKICLEEE 375
+HQ HQ ++Q Q Q H+Q H Q QHQ Q + + ++++ +++
Sbjct: 1343 QHQQHHHQQQQQQQHQQQQQQQHQQQQHQQQQQHQQQQHQQQQQQQKQLQQQQQ 1396
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQRR 417
+HQ +H ++Q Q Q H+Q H Q QHQ Q++
Sbjct: 86 QHQQ-QHMQQQQQQQQHQQQHQQQQHQQQQQHQQQQQQ 122
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQRR 417
+HQ +H ++Q Q Q H+Q H Q QHQ Q++
Sbjct: 86 QHQQ-QHMQQQQQQQQHQQQHQQQQHQQQQQHQQQQQQ 122
>BT022835-1|AAY55251.1| 132|Drosophila melanogaster IP07555p
protein.
Length = 132
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 524 QDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQ 423
Q +H+ +++ Q Q +Q H+G HQ+VQ
Sbjct: 71 QQQQHEQQQQEQQQQQEQQQQQQQHEGASHQEVQ 104
>BT022783-1|AAY55199.1| 142|Drosophila melanogaster IP07355p
protein.
Length = 142
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 524 QDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQ 423
Q +H+ +++ Q Q +Q H+G HQ+VQ
Sbjct: 71 QQQQHEQQQQEQQQQQEQQQQQQQHEGASHQEVQ 104
>BT022733-1|AAY55149.1| 131|Drosophila melanogaster IP07255p
protein.
Length = 131
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 524 QDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQ 423
Q +H+ +++ Q Q +Q H+G HQ+VQ
Sbjct: 71 QQQQHEQQQQEQQQQQEQQQQQQQHEGASHQEVQ 104
>BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p
protein.
Length = 751
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQR 420
R Q +HQ ++Q Q Q H+Q H Q +Q Q Q+
Sbjct: 309 RQQQHQHQQQQQQQQQQQQQHQQQ-HQQQYQQQHYQQ 344
>AF273708-1|AAL35411.1| 118|Drosophila melanogaster
PFTAIRE-interacting factor 2 protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +1
Query: 310 CCG-CC-PYTARCETDCCACYTGC 375
CC CC P C T CC C T C
Sbjct: 53 CCSPCCTPCCTPCCTPCCKCCTPC 76
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQRR 417
+HQ + Q ++Q Q N+H Q HH Q Q Q++
Sbjct: 192 QHQSHQQQQQQQQQDQRTNLHLQIHHHHQQQQQQQQQQ 229
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQRR 417
+HQ + Q ++Q Q N+H Q HH Q Q Q++
Sbjct: 192 QHQSHQQQQQQQQQDQRTNLHLQIHHHHQQQQQQQQQQ 229
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 530 RHQDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQRR 417
+HQ + Q ++Q Q N+H Q HH Q Q Q++
Sbjct: 192 QHQSHQQQQQQQQQDQRTNLHLQIHHHHQQQQQQQQQQ 229
>AE014297-3819|AAF56481.1| 148|Drosophila melanogaster CG5079-PA
protein.
Length = 148
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 524 QDVRHQDARRQDVQLQNIHRQDIHHQGFQHQDVQ 423
Q +H+ +++ Q Q +Q H+G HQ+VQ
Sbjct: 71 QQQQHEQQQQEQQQQQEQQQQQQQHEGASHQEVQ 104
>AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA
protein.
Length = 118
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +1
Query: 310 CCG-CC-PYTARCETDCCACYTGC 375
CC CC P C T CC C T C
Sbjct: 53 CCSPCCTPCCTPCCTPCCKCCTPC 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,142
Number of Sequences: 53049
Number of extensions: 364631
Number of successful extensions: 2187
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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