Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0028
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.9  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    23   5.1  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   6.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.0  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   9.0  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 503 NNLFSKWAVHKISLGTTDLDDKIXLXPFPVV 411
           +N++ KW    I +G   +   I   PFP V
Sbjct: 80  SNVYIKWQSSPIIIGLNPIATHIRNIPFPAV 110


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 503 NNLFSKWAVHKISLGTTDLDDKIXLXPFPVV 411
           +N++ KW    I +G   +   I   PFP V
Sbjct: 80  SNVYIKWQSSPIIIGLNPIATHIRNIPFPAV 110


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 282 LWILXLKFSLPFKYCLI 332
           LWI   K  LP++ CLI
Sbjct: 19  LWIFLEKTKLPYEKCLI 35


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 132 IMPSGQNPHQT 164
           ++P+G NPHQT
Sbjct: 10  MLPTGANPHQT 20


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 439  LSSKSVVPKLILCTAHFENKL 501
            L++K  + +L LC AH   KL
Sbjct: 1085 LATKHTIARLELCAAHLLGKL 1105


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 284 KHYTKIATDDFRYLPNFVYL 225
           + Y KIA D  R+ P  VYL
Sbjct: 205 RRYGKIAFDKLRHSPLVVYL 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,916
Number of Sequences: 2352
Number of extensions: 11159
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)