Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0026
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   3.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 339 MFGLSLRLESKDAFNKFYPWI 401
           +F + L+LESKD    FY ++
Sbjct: 98  LFEILLKLESKDLSRTFYGFV 118


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/41 (19%), Positives = 19/41 (46%)
 Frame = -2

Query: 691 GNNKVKMLLILLEQNIFQGIIADFRQSLGSSDFGRQFEDWF 569
           G     + ++ ++  +F+ +       LG  DF ++  D+F
Sbjct: 28  GGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYF 68


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 158 PEKLFPDKDVTCYKMEISETDEAG 229
           P   +P  +++C +++ S T +AG
Sbjct: 162 PSSSYPANEISCPQVQWSATPQAG 185


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  YFQADFDLISALGTWHVVAII 157
           Y QAD  L    G +H++A++
Sbjct: 198 YLQADMLLWHTFGYYHILAML 218


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  YFQADFDLISALGTWHVVAII 157
           Y QAD  L    G +H++A++
Sbjct: 198 YLQADMLLWHTFGYYHILAML 218


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 657 WSKISFKGLSQIFGNRWGPRILVANSKIGFNCSSV 553
           WS+ + K   QI+G +   R    N KI   C  +
Sbjct: 234 WSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLI 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,855
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)