Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0026
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003191-1|AAO24946.1| 893|Drosophila melanogaster RE59670p pro... 31 1.1
AY118523-1|AAM49892.1| 266|Drosophila melanogaster LD19058p pro... 31 1.1
AY094781-1|AAM11134.1| 642|Drosophila melanogaster LD12333p pro... 31 1.1
AF059613-1|AAC25708.1| 893|Drosophila melanogaster transportin ... 31 1.1
AE014296-1099|AAN12090.1| 893|Drosophila melanogaster CG7398-PC... 31 1.1
AE014296-1098|AAN12089.1| 893|Drosophila melanogaster CG7398-PB... 31 1.1
AE014296-1097|AAF50674.1| 893|Drosophila melanogaster CG7398-PA... 31 1.1
AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB... 31 1.5
AE014134-331|AAF51313.1| 1292|Drosophila melanogaster CG15378-PA... 30 3.4
>BT003191-1|AAO24946.1| 893|Drosophila melanogaster RE59670p
protein.
Length = 893
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 734 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 791
Query: 673 FL 678
+L
Sbjct: 792 YL 793
>AY118523-1|AAM49892.1| 266|Drosophila melanogaster LD19058p
protein.
Length = 266
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 107 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 164
Query: 673 FL 678
+L
Sbjct: 165 YL 166
>AY094781-1|AAM11134.1| 642|Drosophila melanogaster LD12333p
protein.
Length = 642
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 483 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 540
Query: 673 FL 678
+L
Sbjct: 541 YL 542
>AF059613-1|AAC25708.1| 893|Drosophila melanogaster transportin
protein.
Length = 893
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 734 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 791
Query: 673 FL 678
+L
Sbjct: 792 YL 793
>AE014296-1099|AAN12090.1| 893|Drosophila melanogaster CG7398-PC,
isoform C protein.
Length = 893
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 734 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 791
Query: 673 FL 678
+L
Sbjct: 792 YL 793
>AE014296-1098|AAN12089.1| 893|Drosophila melanogaster CG7398-PB,
isoform B protein.
Length = 893
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 734 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 791
Query: 673 FL 678
+L
Sbjct: 792 YL 793
>AE014296-1097|AAF50674.1| 893|Drosophila melanogaster CG7398-PA,
isoform A protein.
Length = 893
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 502 ALGETDICCRLSKESGNYRRAVETNLRIGDQNPRTP-TIAENLR*SLER--YFAPIVLIA 672
A+GE IC +L +E+ Y R V ++L I P TP T+ EN ++ R Y P+ +
Sbjct: 734 AIGE--ICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAP 791
Query: 673 FL 678
+L
Sbjct: 792 YL 793
>AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB
protein.
Length = 1497
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +2
Query: 386 VLSLDLDKNRIHKTLAHDAMMQLHIVDSKDGSS 484
+ S D D++ H+ + HDA+ Q++++ ++DG+S
Sbjct: 714 IFSEDEDEHHQHQGIHHDAVPQVNVITAQDGAS 746
>AE014134-331|AAF51313.1| 1292|Drosophila melanogaster CG15378-PA
protein.
Length = 1292
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 551 ITEEQLKPIFELATKIRGPQRLPKICDNP 637
I+E+ LK + EL+ ++ Q LPK+ NP
Sbjct: 681 ISEDTLKTVLELSKQMIAAQNLPKVLPNP 709
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,967,454
Number of Sequences: 53049
Number of extensions: 666909
Number of successful extensions: 1283
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -