Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0023
(585 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation facto... 284 1e-75
UniRef50_P63241 Cluster: Eukaryotic translation initiation facto... 242 4e-63
UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation... 220 2e-56
UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation facto... 203 2e-51
UniRef50_Q20751 Cluster: Eukaryotic translation initiation facto... 198 6e-50
UniRef50_P80639 Cluster: Eukaryotic translation initiation facto... 196 2e-49
UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation facto... 194 1e-48
UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation facto... 192 7e-48
UniRef50_P34563 Cluster: Eukaryotic translation initiation facto... 190 2e-47
UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2; Bilate... 172 4e-42
UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, wh... 162 6e-39
UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A fa... 153 8e-39
UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;... 151 1e-35
UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putati... 148 8e-35
UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2; ... 146 4e-34
UniRef50_UPI0000498A83 Cluster: translation initiation factor eI... 138 9e-32
UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A fa... 120 2e-26
UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lambl... 117 2e-25
UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1; ... 112 7e-24
UniRef50_Q02217 Cluster: Putative uncharacterized protein YEL034... 89 5e-17
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 73 5e-12
UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3; ... 70 5e-11
UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, who... 66 8e-10
UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;... 64 2e-09
UniRef50_P87252 Cluster: Woronin body major protein precursor; n... 62 1e-08
UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1; ... 60 3e-08
UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7; ... 60 3e-08
UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4; ... 60 5e-08
UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7; ... 58 2e-07
UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5; ... 57 3e-07
UniRef50_A0RUN7 Cluster: Translation elongation factor P (EF-P)/... 56 6e-07
UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2; ... 54 2e-06
UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus ory... 54 3e-06
UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4; ... 53 6e-06
UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|R... 51 2e-05
UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5; ... 48 1e-04
UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL ... 48 2e-04
UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2; ... 47 4e-04
UniRef50_Q9P8K9 Cluster: Woronin body major protein; n=14; Peziz... 45 0.001
UniRef50_Q2H8A0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.025
UniRef50_A7EAR5 Cluster: Predicted protein; n=1; Sclerotinia scl... 39 0.100
UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1; ... 36 0.70
UniRef50_Q16K04 Cluster: Putative uncharacterized protein; n=1; ... 36 0.93
UniRef50_Q0W831 Cluster: Arginase; n=1; uncultured methanogenic ... 35 1.6
UniRef50_UPI0001509B57 Cluster: hypothetical protein TTHERM_0067... 34 2.2
UniRef50_A0GKI9 Cluster: Putative uncharacterized protein; n=5; ... 34 2.2
UniRef50_Q98Q08 Cluster: DNA-directed RNA polymerase subunit alp... 34 2.2
UniRef50_A5ZTK9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_A0J4R3 Cluster: Putative uncharacterized protein precur... 33 3.8
UniRef50_A5BEH2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_UPI000038CFCA Cluster: hypothetical protein Npun0200345... 33 5.0
UniRef50_Q8CS21 Cluster: 2-succinylbenzoate--CoA ligase; n=4; St... 33 5.0
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=... 33 6.6
UniRef50_UPI0000EBEEA7 Cluster: PREDICTED: hypothetical protein;... 33 6.6
UniRef50_Q1XBT2 Cluster: GP80-like protein; n=5; Bovine herpesvi... 33 6.6
UniRef50_Q1MJP5 Cluster: Putative methyl-accepting chemotaxis pr... 32 8.7
UniRef50_Q1EWZ9 Cluster: Zinc finger, CHC2-type; n=1; Clostridiu... 32 8.7
UniRef50_A0YEH9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
>UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation factor
5A; n=4; Coelomata|Rep: Eukaryotic translation
initiation factor 5A - Drosophila melanogaster (Fruit
fly)
Length = 159
Score = 284 bits (696), Expect = 1e-75
Identities = 129/160 (80%), Positives = 145/160 (90%)
Frame = +3
Query: 39 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 218
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 219 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 398
VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119
Query: 399 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 518
+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>UniRef50_P63241 Cluster: Eukaryotic translation initiation factor
5A-1; n=75; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Homo sapiens (Human)
Length = 154
Score = 242 bits (593), Expect = 4e-63
Identities = 108/150 (72%), Positives = 130/150 (86%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
+D FETGD+GASATFPMQCSALRKNGFV+LKGRPCKIVEMSTSKTGKHGHAKVHLVGID
Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 62
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGT 410
IF GKKYEDICPSTHNMDVP++KR D+QL I DGYL+L+ D+G++REDL++P+GDLG
Sbjct: 63 IFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGDLGK 121
Query: 411 QLRTDFDSGKELLCTVLKSCGEECVIAVKA 500
++ +D G+E+L TVL + EE +A+KA
Sbjct: 122 EIEQKYDCGEEILITVLSAMTEEAAVAIKA 151
>UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation
factor 4D; n=2; Mus musculus|Rep: PREDICTED: similar to
initiation factor 4D - Mus musculus
Length = 357
Score = 220 bits (538), Expect = 2e-56
Identities = 98/146 (67%), Positives = 123/146 (84%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
+D FETGD+G SATFPMQCSALRKNGFV+LKG PCKIVEMSTSKTGKHGHAKVHLVG D
Sbjct: 3 DDLDFETGDAGPSATFPMQCSALRKNGFVVLKGGPCKIVEMSTSKTGKHGHAKVHLVGTD 62
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGT 410
IF GKKYEDICPSTHNMDVP++KR ++QL I +GYL+L+ ++ ++REDL++P+GDLG
Sbjct: 63 IFTGKKYEDICPSTHNMDVPNIKRNNFQLVGI-QNGYLSLLQNSEEVREDLRLPEGDLGK 121
Query: 411 QLRTDFDSGKELLCTVLKSCGEECVI 488
++ +D G+E+L TVL + EE ++
Sbjct: 122 EIEQKYDCGEEILITVLSAMTEEAML 147
>UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation factor
eIF-5A; n=5; Dikarya|Rep: Eukaryotic translation
initiation factor eIF-5A - Aspergillus fumigatus
(Sartorya fumigata)
Length = 192
Score = 203 bits (496), Expect = 2e-51
Identities = 89/157 (56%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
Frame = +3
Query: 30 NTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAK 209
+T + + FE+ D+GASAT+PMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAK
Sbjct: 32 STDICSFQHETFESADAGASATYPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAK 91
Query: 210 VHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI 389
VH+V +DIF GKK ED+ PSTHNMDVP+V R +YQL D++DDG+L+LM + G+ ++D+K+
Sbjct: 92 VHIVALDIFTGKKLEDLSPSTHNMDVPNVTRREYQLLDVTDDGFLSLMDEAGNTKDDVKL 151
Query: 390 PDGDLGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 497
P+G++G +++ F + GK+ T+L + GE+ + VK
Sbjct: 152 PEGEVGERIQKMFNEEGKDCNVTILTAMGEQACMDVK 188
>UniRef50_Q20751 Cluster: Eukaryotic translation initiation factor
5A-2; n=66; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-2 - Caenorhabditis elegans
Length = 161
Score = 198 bits (484), Expect = 6e-50
Identities = 95/154 (61%), Positives = 118/154 (76%), Gaps = 2/154 (1%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
+D HF TGDSGA+ATFP QCSALRKN VM+KGRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 7 DDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLG 407
IF KK EDICPSTHNMDVP VKR +Y L I DDGY +LM ++ + ++DLK+PD +LG
Sbjct: 67 IFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELG 125
Query: 408 TQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 506
Q+R ++ + +L V+ + GEE ++ K +T
Sbjct: 126 QQIRDAYEKDEGSVLVQVVSAIGEEAILGWKVST 159
>UniRef50_P80639 Cluster: Eukaryotic translation initiation factor
5A; n=58; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A - Zea mays (Maize)
Length = 160
Score = 196 bits (479), Expect = 2e-49
Identities = 87/155 (56%), Positives = 119/155 (76%), Gaps = 2/155 (1%)
Frame = +3
Query: 39 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 215
M D E+ HFE+ D+GAS T+P Q +RKNGF+++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 216 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 392
V IDIFNGKK EDI PS+HN D+PHV R +YQL DIS+DG+++L+ +G+ ++DL++P
Sbjct: 61 FVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPT 120
Query: 393 DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 497
D L Q++ F+SGK+L+ TV + GEE + A+K
Sbjct: 121 DETLVAQIKEGFESGKDLVVTVQSAMGEEQICALK 155
>UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation factor
5A-1; n=2; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Plantago major (Common
plantain)
Length = 159
Score = 194 bits (474), Expect = 1e-48
Identities = 87/151 (57%), Positives = 114/151 (75%), Gaps = 2/151 (1%)
Frame = +3
Query: 51 EDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGI 227
E+ FE D+GAS TFP Q +RKNG++ +K RPCK+VE+STSKTGKHGHAK H V I
Sbjct: 4 EEHQFEAQADAGASKTFPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHFVAI 63
Query: 228 DIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-L 404
DIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ DNG ++DL++P D L
Sbjct: 64 DIFNGKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDAL 123
Query: 405 GTQLRTDFDSGKELLCTVLKSCGEECVIAVK 497
TQ++ F GK+L+ +V+ + GEE + A+K
Sbjct: 124 ATQIKEGFAEGKDLVVSVMSAMGEEQINAIK 154
>UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation factor
5A; n=13; Alveolata|Rep: Eukaryotic translation
initiation factor 5A - Plasmodium falciparum
Length = 161
Score = 192 bits (467), Expect = 7e-48
Identities = 86/151 (56%), Positives = 118/151 (78%), Gaps = 6/151 (3%)
Frame = +3
Query: 63 FETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 242
++ D+GAS T+P+Q A++KNG VMLK PCK+V+ STSKTGKHGHAK H+VGIDIF G
Sbjct: 7 YDNIDAGASQTYPVQAGAIKKNGHVMLKEHPCKVVDYSTSKTGKHGHAKAHIVGIDIFTG 66
Query: 243 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP---DGDL--- 404
+KYEDICP++HNMDVP VKR + QL DI++DG+++L+ DNGD ++DL +P +G+L
Sbjct: 67 RKYEDICPTSHNMDVPVVKRTELQLIDITEDGFVSLLYDNGDTKDDLSLPKDTEGNLDEV 126
Query: 405 GTQLRTDFDSGKELLCTVLKSCGEECVIAVK 497
Q+R FD+GK +L +VL +CG+E +IA K
Sbjct: 127 AKQIRNLFDNGKSVLVSVLSACGQEKIIAAK 157
>UniRef50_P34563 Cluster: Eukaryotic translation initiation factor
5A-1; n=5; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Caenorhabditis elegans
Length = 161
Score = 190 bits (463), Expect = 2e-47
Identities = 89/154 (57%), Positives = 118/154 (76%), Gaps = 2/154 (1%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
++ F++ +SGA+ATFP QCSALRKN VM++GRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 7 DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLG 407
IF KK EDICPSTHNMDVP VKR +Y L I +DG+ +LM ++ +L++DLK+P+GDLG
Sbjct: 67 IFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLG 125
Query: 408 TQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 506
+R + + +L V+ +CGEE ++ K +T
Sbjct: 126 NTIREALEKDEGSVLVQVVAACGEEAILGYKIST 159
>UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2;
Bilateria|Rep: Clone ZZZ427 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 160
Score = 172 bits (419), Expect = 4e-42
Identities = 81/159 (50%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Frame = +3
Query: 39 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 218
M ED F TG+SGAS T P QCS LRK G+V++K RPCKI+EMSTSKTGKHG AKVHL
Sbjct: 1 MSTFEDEEFATGESGASKTEPKQCSLLRKGGYVLMKERPCKIMEMSTSKTGKHGSAKVHL 60
Query: 219 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 398
VGIDIF GKKYE+ICPS+ M VP + R++YQL D+ DG+L+LM+D+ + E++ +PD
Sbjct: 61 VGIDIFTGKKYEEICPSSQTMYVPIIARKEYQLIDVK-DGFLSLMSDDFCVLENIPVPDN 119
Query: 399 DLGTQLRTDFDSGKEL---LCTVLKSCGEECVIAVKANT 506
D+G +++ ++S ++ + T++ + E+ AV+ ++
Sbjct: 120 DVGKEIQEKWNSKGDMDNVIVTIVTTMDEQQAHAVRTSS 158
>UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 161
Score = 162 bits (393), Expect = 6e-39
Identities = 73/150 (48%), Positives = 106/150 (70%), Gaps = 4/150 (2%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
++ FE G++G+S T+ +L+K G+VMLKG PCKI ++STSK GKHGHAK +VG D
Sbjct: 4 DENQFEQGNAGSSHTYTESAGSLKKGGYVMLKGHPCKITDVSTSKAGKHGHAKASIVGKD 63
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP----DG 398
IF K YED P++HN+DVP V +++Y L DI DG++ LM ++G +EDLK+P D
Sbjct: 64 IFTNKTYEDSAPTSHNIDVPFVTKKEYTLMDIQGDGFVILMNEDGSTKEDLKLPETEDDF 123
Query: 399 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 488
+L ++R FD+GK+LL +VL + GEE ++
Sbjct: 124 NLVKEIREMFDAGKDLLISVLSAMGEEKIV 153
>UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor eIF-5A family protein -
Tetrahymena thermophila SB210
Length = 184
Score = 153 bits (372), Expect(2) = 8e-39
Identities = 58/109 (53%), Positives = 89/109 (81%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
++ +F+ G++G+S T+PMQ ++KNG+ ML+G PCK+ EM+T K GKHGHAK ++G+D
Sbjct: 3 DEENFQQGEAGSSYTYPMQAGNIKKNGYAMLRGFPCKVTEMTTCKAGKHGHAKATIIGVD 62
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRE 377
IF G+KYED CP++HNM++P VK+++YQL +I+DD YLTL+ +NG+ +E
Sbjct: 63 IFTGRKYEDSCPTSHNMEIPFVKKQEYQLMNIADDNYLTLLLENGETKE 111
Score = 29.5 bits (63), Expect(2) = 8e-39
Identities = 10/29 (34%), Positives = 24/29 (82%)
Frame = +3
Query: 411 QLRTDFDSGKELLCTVLKSCGEECVIAVK 497
+LR+DF+S K++L +++++ G+E +I+ +
Sbjct: 152 KLRSDFESQKDILISIIQAMGQEKMISYR 180
>UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;
n=1; Guillardia theta|Rep: Translation initiation factor
eIF-5A.2 - Guillardia theta (Cryptomonas phi)
Length = 158
Score = 151 bits (366), Expect = 1e-35
Identities = 62/148 (41%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
Frame = +3
Query: 75 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 254
D+GAS T P++ +K G +++KG PCKI+++STSKTGKHGHAK + +DIF GKKY+
Sbjct: 11 DNGASETTPIKAGNCKKGGLLVIKGNPCKIIDISTSKTGKHGHAKAIITAVDIFTGKKYQ 70
Query: 255 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLK--IPDGDLGTQLRTDF 428
+ P++HN+D P++ + +YQL I +DG+++LM ++G++REDL + + ++ +++ +F
Sbjct: 71 ESAPTSHNLDQPNLTKTEYQLIHIEEDGFVSLMDEDGNIREDLSLDLKNDEIHVKIKNEF 130
Query: 429 DSGKELLCTVLKSCGEECVIAVKANTAL 512
D KE++ TV+K +E +I+ K N +
Sbjct: 131 DQSKEIVVTVMKCLQKEKIISFKENNKI 158
>UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putative;
n=8; Trypanosomatidae|Rep: Eukaryotic initiation factor
5a, putative - Leishmania major
Length = 166
Score = 148 bits (359), Expect = 8e-35
Identities = 72/155 (46%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Frame = +3
Query: 54 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 233
D + G AS T+P+ AL+K G+V + GRPCK++++S SKTGKHGHAKV +V DI
Sbjct: 7 DFSHQGGGDNASKTYPLPAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDI 66
Query: 234 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDD------GYLTLMADNGDLREDLKI-P 392
F G + ED PSTHN++VP VK Y + DI + +L+LM D G+ REDL + P
Sbjct: 67 FTGNRLEDQAPSTHNVEVPFVKTFTYSVLDIQPNEDSSLPSHLSLMDDEGESREDLDMPP 126
Query: 393 DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 497
D L Q++ FDSGKE+L V+ + G E V+ K
Sbjct: 127 DAALAAQIKEQFDSGKEVLVVVVSAMGTEQVLQTK 161
>UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2;
Alveolata|Rep: Translation initiation factor 5A -
Crypthecodinium cohnii (Dinoflagellate)
Length = 162
Score = 146 bits (353), Expect = 4e-34
Identities = 73/163 (44%), Positives = 101/163 (61%), Gaps = 11/163 (6%)
Frame = +3
Query: 51 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 230
ED FE+ D+GASAT+P Q +RK ++M+KGRPCK +E+STSKTGKHGHAK H+V +D
Sbjct: 4 EDHTFESTDAGASATYPQQAGEIRKGSYLMIKGRPCKCIEVSTSKTGKHGHAKAHIVALD 63
Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP------ 392
IF+GKKYED+CP++HN+DVP VKR +Y LT DG L D ++DL +P
Sbjct: 64 IFSGKKYEDLCPTSHNLDVPFVKRTEYLLT---ADGTLARACDGH--KDDLNLPTVVKVG 118
Query: 393 -----DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANT 506
D + ++ + G + V + GEE +I K +
Sbjct: 119 EPTDRDKKVTAEILESVEKGTTIFVIVQAASGEEKIIQTKTTS 161
>UniRef50_UPI0000498A83 Cluster: translation initiation factor
eIF-5A; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-5A - Entamoeba
histolytica HM-1:IMSS
Length = 165
Score = 138 bits (334), Expect = 9e-32
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +3
Query: 93 TFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPST 272
T P + +L+ GFV++ PCKI E + +K GKHGHAKV L GID+F GKKY D CP+
Sbjct: 29 TIPTKAGSLKVGGFVVIGTFPCKITEFNKTKDGKHGHAKVTLTGIDVFTGKKYTDCCPAH 88
Query: 273 HNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLC 452
N+DVP +KR +Y L DI DDGYLTL+ ++G +R D+K+P +LG ++ +F+ K L+C
Sbjct: 89 SNVDVPVIKRVEYSLQDI-DDGYLTLLDEDGTVRSDIKLPKNELGKEIEHEFNE-KSLIC 146
Query: 453 TVLKSCGEECVIAVK 497
+ +E V+ K
Sbjct: 147 IIQVFGDQEMVVGYK 161
>UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A
family protein; n=2; Trichomonas vaginalis G3|Rep:
Translation initiation factor eIF-5A family protein -
Trichomonas vaginalis G3
Length = 167
Score = 120 bits (290), Expect = 2e-26
Identities = 59/157 (37%), Positives = 98/157 (62%), Gaps = 6/157 (3%)
Frame = +3
Query: 54 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 233
D + D+G+ + + L+K G+V+++GRPC++V+++ SKTGKHGHAK + G D+
Sbjct: 11 DLEIQEVDAGSQEKATIPVNKLKKGGYVLIEGRPCRVVDITKSKTGKHGHAKAGIAGTDL 70
Query: 234 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI-PDGDLGT 410
F G++YE P++H ++VP V R DY L +I DDG+ L+ +G LRED+ + P+G+
Sbjct: 71 FTGRRYETHLPTSHEIEVPFVDRSDYGLINI-DDGHTQLLTLDGTLREDVDLPPEGNEMR 129
Query: 411 QLRTDF-----DSGKELLCTVLKSCGEECVIAVKANT 506
Q D ++ +++ TVL S GE ++ K +T
Sbjct: 130 QRVIDLFNECVNTNDQVVVTVLSSNGENLIVDCKKST 166
>UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_576_14492_14043 - Giardia lamblia
ATCC 50803
Length = 149
Score = 117 bits (281), Expect = 2e-25
Identities = 58/141 (41%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Frame = +3
Query: 96 FPMQCSALRKNGFVMLKGR-PCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPST 272
+P Q L+K ++++K PCK+ E+STSKTGKHGHAK + +DIF GKKYED CPS+
Sbjct: 9 YPKQAGNLKKGDYIVMKDVFPCKVTEISTSKTGKHGHAKCSITAVDIFTGKKYEDSCPSS 68
Query: 273 HNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP--DGDLGTQLRTDFDSG-KE 443
HN+ P+V R DY L +I DD Y D D + +++P + +L LR F++G K
Sbjct: 69 HNIMCPNVSRTDYLLINI-DDEY-AFYFDQNDAEQQVRLPLENEELVADLRAAFEAGDKT 126
Query: 444 LLCTVLKSCGEECVIAVKANT 506
++ + ++ E ++A K T
Sbjct: 127 IMINIQRAMNTEGIVAFKTET 147
>UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1;
Aspergillus oryzae|Rep: Translation initiation factor 5A
- Aspergillus oryzae
Length = 154
Score = 112 bits (269), Expect = 7e-24
Identities = 57/148 (38%), Positives = 90/148 (60%)
Frame = +3
Query: 54 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 233
D FE AS T+ S L K V+++GRPCKI+E+S K G + +HLV DI
Sbjct: 8 DQTFEQHQQHASPTYAALVSTLTKGAHVIIRGRPCKILEIS--KIGTN----IHLVARDI 61
Query: 234 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 413
F + D ST ++++PHV R +Y L +I D+G+L L +G +++++K+P G LG Q
Sbjct: 62 FTDRILSDDIESTQSVEIPHVYRNEYMLVNI-DEGFLNLTNQDGTMKDNVKVPGGGLGQQ 120
Query: 414 LRTDFDSGKELLCTVLKSCGEECVIAVK 497
+ DF++G +LL V+ + GEE ++V+
Sbjct: 121 IEQDFEAGTDLLIAVISAMGEEHAVSVR 148
>UniRef50_Q02217 Cluster: Putative uncharacterized protein
YEL034C-A; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YEL034C-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 200
Score = 89.4 bits (212), Expect = 5e-17
Identities = 49/126 (38%), Positives = 67/126 (53%)
Frame = -2
Query: 494 DGDDALLTAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQ 315
+GD T G Q L ++ S Q + T +++ VTV HQ Q +I ++ Q
Sbjct: 31 EGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQFTFWSLDIILSVTVHVHQRQETVI-NVQQ 89
Query: 314 LVVFALHVRYVHVVCGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWTTLQHN 135
LV +L HVV IF L T EDIN NQ++FSV VL+ GH +NL W+TL N
Sbjct: 90 LVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDN 149
Query: 134 ETIFTQ 117
ET+ +Q
Sbjct: 150 ETVLSQ 155
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = +3
Query: 159 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 338
K+ S + T A H VGID+FNGKK E+ PS+HN DVPHV R DYQL DI +DG
Sbjct: 184 KMARSSRTGTLSLSLALCHFVGIDVFNGKKLENFVPSSHNCDVPHVNRIDYQLIDIPEDG 243
Query: 339 Y 341
Y
Sbjct: 244 Y 244
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 72.9 bits (171), Expect = 5e-12
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3
Query: 213 HLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI 389
H VGID+FNGKK E+ PS+HN DVPHV R DYQL DI +DGY + +R ++ I
Sbjct: 245 HFVGIDVFNGKKLENFVPSSHNCDVPHVNRIDYQLIDIPEDGYSDIKVKVTGMRMEIII 303
Score = 53.2 bits (122), Expect = 4e-06
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 240 GKKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 341
GKK E + PS+HN DVPHV DYQL DI +DGY
Sbjct: 379 GKKLEKVVPSSHNCDVPHVNGTDYQLIDILEDGY 412
>UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3;
Archaea|Rep: Translation initiation factor 5A -
Aeropyrum pernix
Length = 139
Score = 69.7 bits (163), Expect = 5e-11
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
L+K ++++ G PC+IVEMS +KTGKHG AK H+V I +F+G+K + P + +P +
Sbjct: 11 LKKGSYIVIDGEPCRIVEMSRAKTGKHGSAKAHVVAICVFSGQKKSLVAPVDTRVQIPVI 70
Query: 297 -KREDYQLTDISD 332
KR L D+ D
Sbjct: 71 EKRLGQVLADMGD 83
>UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 65.7 bits (153), Expect = 8e-10
Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHN-MDVPH 293
L++ +++L PCKI+ + + +HGH + ++ K+ I S H +++P
Sbjct: 19 LQQGTYLLLDECPCKILRLQLFFS-RHGHCAY--IEVENAFSKQIVKIQRSIHGKLEIPL 75
Query: 294 VKREDYQLTDISDDGYLTLMADNGDLREDLKIPD-GDLGTQLRTDFDSGKELLCTVLKSC 470
++ E+Y L I +D +LTL+ G +RED+K+P +L +LR F+ GK+++ ++K
Sbjct: 76 IQFEEYSLIGIQNDDFLTLLNSKGTIREDIKMPQFKELANKLRMWFEEGKDIIVQIIKYM 135
Query: 471 GEE 479
+E
Sbjct: 136 DKE 138
>UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;
Archaea|Rep: Translation initiation factor 5A -
Pyrobaculum aerophilum
Length = 138
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/78 (33%), Positives = 47/78 (60%)
Frame = +3
Query: 102 MQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNM 281
++ L++ +V++ G PC++VE+ SKTGKHG AK +V + +F+G K P +
Sbjct: 12 VEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQV 71
Query: 282 DVPHVKREDYQLTDISDD 335
+VP +++ Q+ +S D
Sbjct: 72 EVPIIEKFTAQILSVSGD 89
>UniRef50_P87252 Cluster: Woronin body major protein precursor; n=4;
Pezizomycotina|Rep: Woronin body major protein precursor
- Neurospora crassa
Length = 176
Score = 61.7 bits (143), Expect = 1e-08
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Frame = +3
Query: 69 TGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIFNGK 245
TG AS T + C +R ++L+GRPC+++ +STS TG+H + +G+D+F +
Sbjct: 24 TGTGSASQTVTIPCHHIRLGDILILQGRPCQVIRISTSAATGQHRY-----LGVDLFTKQ 78
Query: 246 KYEDI------CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD-GDL 404
+E+ PS + + Y++ D+ DG + M + GD++++L + D L
Sbjct: 79 LHEESSFVSNPAPSVVVQTMLGPVFKQYRVLDM-QDGSIVAMTETGDVKQNLPVIDQSSL 137
Query: 405 GTQLRTDFDSGK-ELLCTVLKSCGEECVIAVK 497
+L+ F+SG+ + V+ G E + +K
Sbjct: 138 WNRLQKAFESGRGSVRVLVVSDHGREMAVDMK 169
>UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1;
Bigelowiella natans|Rep: Translation initiation factor
5A - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 173
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 111 SALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN-GKKYEDICPSTHNMDV 287
S ++ ++MLKGRP +V+ + +K GKHGH K ++V D+ KKY+ +CP N+
Sbjct: 15 SHVKPGTYLMLKGRPTSVVKATFAKPGKHGHVKCNIVAKDLLKVDKKYQHMCPGHDNIYQ 74
Query: 288 PHVKREDYQLT 320
P VK+ D L+
Sbjct: 75 PVVKKYDLVLS 85
>UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Archaeoglobus fulgidus
Length = 128
Score = 60.5 bits (140), Expect = 3e-08
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
LR+ G+V++ PC+I+ +S SK GKHG AK + I IF+ +K + P T + VP V
Sbjct: 10 LREGGYVVIDDEPCEILSISVSKPGKHGAAKARIDAIGIFDSQKRSIVQPVTAKIYVPIV 69
Query: 297 KREDYQLTDISDDGYLTLMADNGDLRE-DLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 473
+R+ Q+ IS G + + D +L++P+ +L+ + G+E++ L+S G
Sbjct: 70 ERKRAQI--ISVTGNVAQLMDLETYETFELEVPE-----ELKDKMEQGREVI--YLESLG 120
Query: 474 E 476
+
Sbjct: 121 K 121
>UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4;
Thermoplasmatales|Rep: Translation initiation factor 5A
- Picrophilus torridus
Length = 129
Score = 59.7 bits (138), Expect = 5e-08
Identities = 23/73 (31%), Positives = 47/73 (64%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
L+ ++++ PC+IV+++ SK GKHG AK +V I +F+ +K+ + P H + VP +
Sbjct: 11 LKVGRYILIDDSPCRIVDITMSKPGKHGEAKGRIVAIGVFDNQKHSVVYPVKHKVKVPVI 70
Query: 297 KREDYQLTDISDD 335
+++ Q+ I+++
Sbjct: 71 TKKNAQVLSIANN 83
>UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Pyrococcus furiosus
Length = 138
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/78 (30%), Positives = 45/78 (57%)
Frame = +3
Query: 102 MQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNM 281
+Q S L+ ++++ PC+IV ++ S GKHG AK + + IF+GK + P++ +
Sbjct: 7 VQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEV 66
Query: 282 DVPHVKREDYQLTDISDD 335
DVP + + Q+ ++ D
Sbjct: 67 DVPIIDKRTAQVIAVTPD 84
>UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5;
Methanococcus|Rep: Translation initiation factor 5A -
Methanococcus maripaludis
Length = 131
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +3
Query: 87 SATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICP 266
+ T P + AL+ +V++ G C++++ + SK GKHG AKV L + IF K E + P
Sbjct: 2 AGTKPSELGALKVGQYVVIDGIACRVMDTAHSKPGKHGGAKVRLTAMGIFEPVKKEHVGP 61
Query: 267 STHNMDVPHVKREDYQL 317
++ +DVP + + Q+
Sbjct: 62 ASSRIDVPLIDKRKGQV 78
>UniRef50_A0RUN7 Cluster: Translation elongation factor P
(EF-P)/translation initiation factor 5A; n=2;
Thermoprotei|Rep: Translation elongation factor P
(EF-P)/translation initiation factor 5A - Cenarchaeum
symbiosum
Length = 157
Score = 56.0 bits (129), Expect = 6e-07
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +3
Query: 99 PMQCSALRKNGFVMLK------GRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 260
P + +L+ +++L G PC+I E TSK GKHG AK +VG+ +F+G+K +
Sbjct: 25 PSELGSLKIGSYILLPVGDQATGEPCRISEYDTSKPGKHGAAKARIVGVGVFDGQKRPHV 84
Query: 261 CPSTHNMDVPHVKREDYQLTDI 326
P + + VP + + Q+ I
Sbjct: 85 GPVSMQVHVPLIDKRTGQVISI 106
>UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 175
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +3
Query: 291 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 464
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 465 SCG 473
+ G
Sbjct: 106 AMG 108
>UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 132
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 30 NTTMGDIE--DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGH 203
NT D E D FE G FP CS LR G V L+G PC+I ++ TS +
Sbjct: 6 NTRQEDNEQYDVSFEIGGRQIDG-FPTPCSNLRAGGLVYLRGHPCEITDIHTSPASR--- 61
Query: 204 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
+ V +VG DI G+ +D P + VP +
Sbjct: 62 SVVQIVGFDIHTGQFMDDQYPLRETVFVPRI 92
>UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4;
Euryarchaeota|Rep: Translation initiation factor 5A -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 127
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
L++ ++++ PCKI+ +S SK GKHG AK L + IF+G K + P + + P V
Sbjct: 10 LKEGKYLLVDDEPCKILSISVSKPGKHGAAKARLDVVGIFDGVKRSIVQPVSAKVYAPIV 69
Query: 297 KREDYQLTDIS 329
+R + Q+ I+
Sbjct: 70 ERRNAQVISIA 80
>UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|Rep:
Vacuolar-ATPase - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 181
Score = 50.8 bits (116), Expect = 2e-05
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = +3
Query: 72 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIFNGKK 248
G A T + C +R ++L+GRPC+++ +STS TG+H + +G+D+F +
Sbjct: 30 GGDYAPNTVSIPCHHIRLGDILLLQGRPCQVIRISTSAATGQHRY-----LGVDLFTKEL 84
Query: 249 YEDI------CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD-GDLG 407
E+ PS + + Y++ D+ G++ M + GD++++L + + +L
Sbjct: 85 REESSSISTPSPSVVVQTMCGPVFKQYRVLDM-QAGHIVAMTETGDVKQNLPVSEQSNLY 143
Query: 408 TQLRTDFDSGK-ELLCTVLKSCGEECV 485
+L+ F+SG+ + V+ G E V
Sbjct: 144 ERLQRAFESGRGSVRALVVSDNGRELV 170
>UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5;
Halobacteriaceae|Rep: Translation initiation factor 5A -
Halobacterium salinarium (Halobacterium halobium)
Length = 127
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +3
Query: 117 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 296
L++ +VM++ C+I ST+K GKHG AK + +F+GKK P + VP V
Sbjct: 11 LQEGNYVMMEDAACQINAYSTAKPGKHGSAKARIEAEGVFDGKKRSLSQPVDAKIWVPIV 70
Query: 297 KREDYQLTDISDDGYLTLM 353
R+ Q+ D +M
Sbjct: 71 NRKQGQIVSKESDTVAQVM 89
>UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL
repeat - Ostreococcus tauri
Length = 1783
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 342 LTLMADNGDLREDLKIPDG-----DLGTQLRTDFDSGKELLCTVLKS 467
++LMA+NGD REDLK+P G L Q+R FD GKE+ T+L S
Sbjct: 1 MSLMAENGDTREDLKLPSGHDDADKLAEQIRVAFDEGKEVAVTILCS 47
>UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2;
Nanoarchaeum equitans|Rep: Translation initiation factor
5A - Nanoarchaeum equitans
Length = 144
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 147 GRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKR 302
G KIV + TSK GKHG AK + I + +GKK I P++ + VP +K+
Sbjct: 23 GEVYKIVSIETSKPGKHGSAKARIEAISVTSGKKIVIIKPTSDPIKVPQIKK 74
>UniRef50_Q9P8K9 Cluster: Woronin body major protein; n=14;
Pezizomycotina|Rep: Woronin body major protein -
Emericella nidulans (Aspergillus nidulans)
Length = 221
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Frame = +3
Query: 87 SATFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIFNGKKY-EDI 260
S T P+ +R ++L+GRPC+++ +S+S T + + V L ++ + +
Sbjct: 75 SETVPIPTHFIRVGDILVLQGRPCQVIRISSSPMTDQRRYTGVDLFTRELHEESSFVSNP 134
Query: 261 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLK-IPDGDLGTQLRTDFDSG 437
PS + + Y++ DI +G + + ++GD++ + IP G+L +++ F G
Sbjct: 135 KPSVVVQTMLGPVYKTYRILDI-QEGTIVALTESGDVKSGIPVIPQGNLYQRIKDAFLEG 193
Query: 438 K-ELLCTVLKSCGEECVIAVK 497
+ + V+ G E V+ K
Sbjct: 194 RGSVRALVINDGGRELVVDYK 214
>UniRef50_Q2H8A0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 199
Score = 40.7 bits (91), Expect = 0.025
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 93 TFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIFNGKKY-EDICP 266
T P+ C +R +MLK PC+++++ TS TG++ + V ++ I + + P
Sbjct: 41 TIPIPCHDIRLGDILMLKDSPCRVIQILTSAATGRYTYRGVDILTEYIHEATSFVSNPSP 100
Query: 267 STHNMDVPHVKREDYQLTDISDDGYLTLMADNGD-LREDLKIPDGD-LGTQLRT 422
+ + + Y I+ + LT M + GD + E++++ DG L T+L T
Sbjct: 101 NVAVQTMLRPRLFQYHAVVITQNS-LTCMNETGDVVVENMRVMDGSGLWTRLAT 153
>UniRef50_A7EAR5 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 712
Score = 38.7 bits (86), Expect = 0.100
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 237 NGKKYEDICPSTHNMDVPHVKREDYQLTD 323
NG KYED CPS+HN D P ++E + D
Sbjct: 235 NGCKYEDNCPSSHNYDAPTRRKEQWAAND 263
>UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1;
Silicibacter pomeroyi|Rep: Putative uncharacterized
protein - Silicibacter pomeroyi
Length = 138
Score = 35.9 bits (79), Expect = 0.70
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +3
Query: 288 PHVKR--EDYQLTDISDDGYLTLMADNG-----DLREDLKIPDGDLGTQLRTDFDSGKEL 446
PHVK E Y DI+ GYL L +D G + +L DG G L TD +G EL
Sbjct: 51 PHVKEFLERYSYPDINRPGYLILESDEGRFMNHSMYPNLDFADGIWGVAL-TDIPAGTEL 109
Query: 447 LC 452
C
Sbjct: 110 TC 111
>UniRef50_Q16K04 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 526
Score = 35.5 bits (78), Expect = 0.93
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +3
Query: 63 FETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 242
F ASA P + N V +I +M++SK K ++ L +I N
Sbjct: 122 FHAVQEQASAAIPALEQEVDTNVLVGQNLVELRIEKMTSSKRKKRASEEIPLSDKEIENE 181
Query: 243 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ--- 413
KK D+ + H+ +ED LTD+SD GY L + + +D I D D Q
Sbjct: 182 KK--DM--------LQHIVQEDRLLTDLSDVGYTELSNNVPLIHDDSDIDDNDEVHQDEE 231
Query: 414 --LRTDFDSGKELLCTVLKSC 470
+ DFD+ E+ + C
Sbjct: 232 FNVLDDFDTDSEVEVADVLDC 252
>UniRef50_Q0W831 Cluster: Arginase; n=1; uncultured methanogenic
archaeon RC-I|Rep: Arginase - Uncultured methanogenic
archaeon RC-I
Length = 294
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 425 VSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFALHVRYVHVVCGGTD-IFI 249
V + C + RD + L + + + V +RDI ++ ++ + + + + C GTD I +
Sbjct: 159 VCEENCVLIGARDLDPLEREALKKSKVTVFTMRDIDEIGMYKVMKKAMKIACNGTDAIHV 218
Query: 248 LFTIEDINP 222
F ++ I+P
Sbjct: 219 SFDLDSIDP 227
>UniRef50_UPI0001509B57 Cluster: hypothetical protein
TTHERM_00670750; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00670750 - Tetrahymena
thermophila SB210
Length = 278
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 521 LFVESCVCFDGDDALLTAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQ 348
LFV+ C+C GD ++ G +QF A V+ QL A+ I+D + T + S Q
Sbjct: 13 LFVQVCICLPGD--MIINGSVVSQKQFQAQKIVTNQLFAQSIIQDSYLCTAQNIFSEQ 68
>UniRef50_A0GKI9 Cluster: Putative uncharacterized protein; n=5;
Burkholderiales|Rep: Putative uncharacterized protein -
Burkholderia phytofirmans PsJN
Length = 913
Score = 34.3 bits (75), Expect = 2.2
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -2
Query: 374 TQVTVVSHQGQVAIIRDISQLVVFALHVRYVHVVCGGT-DIFILFTIEDINPNQVNFS-V 201
T V++ +V ++ D+ QL ALH H GGT F F D+ Q +
Sbjct: 282 TDRLVLADHARVQLLFDLQQLFALALH-HARHRNAGGTRHDFSDFLRTDLCTQQARTRRI 340
Query: 200 AVLSGFGCGHFNNLAWTTLQ 141
+L+G G GHF L + T Q
Sbjct: 341 VLLAGLGLGHFLQLRFETRQ 360
>UniRef50_Q98Q08 Cluster: DNA-directed RNA polymerase subunit alpha;
n=1; Mycoplasma pulmonis|Rep: DNA-directed RNA
polymerase subunit alpha - Mycoplasma pulmonis
Length = 333
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 213 HLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP 392
+L +D+F KK E + PS H++D+ + + + GY T +AD L ED +
Sbjct: 247 NLDAVDVFEQKKQEKVEPSIHSVDITSLDLSVRSINALKRQGY-TKLADILTLTEDDLVA 305
Query: 393 DGDLG 407
+LG
Sbjct: 306 VKNLG 310
>UniRef50_A5ZTK9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 1061
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 261 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 440
CP +++ PH ++D + DIS++ + + LR+D + GD R+++D+ K
Sbjct: 536 CPVCGSIEHPHPAKKDVESVDISEEKLQNMQTNVDKLRKDQEKAAGD-AAAARSEYDTRK 594
Query: 441 E 443
+
Sbjct: 595 D 595
>UniRef50_A0J4R3 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella woodyi ATCC 51908|Rep:
Putative uncharacterized protein precursor - Shewanella
woodyi ATCC 51908
Length = 452
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 336 GYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVL---KSCGEECVIAVKANT 506
G L++ +DN ++ D ++P+G+ T L TD + K++ T + GE +A+ AN
Sbjct: 68 GLLSINSDNYEITVDAQLPNGETTTVLTTDLVAEKDIEYTAVAIGNVAGESLDLALIANA 127
Query: 507 ALD 515
D
Sbjct: 128 TSD 130
>UniRef50_A5BEH2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 636
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 484 THSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRRSPLSAIRVR 341
THS P T H + PL +C P PS +L RRSP R+R
Sbjct: 41 THSIPYTHQT-HQYTHPLPFISISCSPXQPSPLLPPPRRSPAGTSRIR 87
>UniRef50_UPI000038CFCA Cluster: hypothetical protein Npun02003457;
n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02003457 - Nostoc punctiforme PCC 73102
Length = 161
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 583 KELLNCKK-IKKFVNPINAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKSVRNCV 407
KE+ + K+ KKF P + + +TA T SS QD +NN + + K + N
Sbjct: 13 KEISDLKEGAKKFSIPFDKTRNENDLLIDLITAFTESSNQDIQDFYNNFVKIRKDIINET 72
Query: 406 PRSPSGILR 380
+ P +LR
Sbjct: 73 VQQPHELLR 81
>UniRef50_Q8CS21 Cluster: 2-succinylbenzoate--CoA ligase; n=4;
Staphylococcus|Rep: 2-succinylbenzoate--CoA ligase -
Staphylococcus epidermidis (strain ATCC 12228)
Length = 474
Score = 33.1 bits (72), Expect = 5.0
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +3
Query: 147 GRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDI 326
G+ + VE+ +GH ++ + G ++ NG Y T + D + + D + +I
Sbjct: 299 GKTSENVEVKIKNPNAYGHGELLIKGENVMNGYLYPKYLKDTFDND-GYFQTGD--IAEI 355
Query: 327 SDDGYLTLMADNGDLREDLKIPDGD--LGTQLRT---DFDSGKELLC 452
D+GY+ + D R+DL I G+ Q+ T DF+ ++ +C
Sbjct: 356 DDEGYVIIY----DRRKDLIISGGENIYPYQIETIAKDFEGIEDAVC 398
>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to Ac1147
- Monodelphis domestica
Length = 510
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 436 PLSKSVRNCVPRSPSGILRSSRRSPLSAIRVR 341
PLS V + P SPS + R SR PL+A VR
Sbjct: 475 PLSSGVGSVFPPSPSALFRRSRAPPLAACPVR 506
>UniRef50_UPI0000EBEEA7 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 178
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 49 SKTHTLRPETPGPQPPSPCNVRPCVKMVSLC*RV-VHARLLKCPHPKPESTAT 204
+K H TPG PS PC + LC R HA+L K P P+ T
Sbjct: 30 AKAHARHAPTPGSAQPSRRLSFPCRRTPGLCRRANCHAQLAKEPRSTPQRRGT 82
>UniRef50_Q1XBT2 Cluster: GP80-like protein; n=5; Bovine herpesvirus
4|Rep: GP80-like protein - Bovine herpesvirus 4 (BoHV-4)
(Movar virus)
Length = 274
Score = 32.7 bits (71), Expect = 6.6
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +1
Query: 193 STATLKFTWLGLISSMVKSMKISVPPHTTWTYLT*SAKT-TN*LISRMMAT*P*WLTTVT 369
ST+T T SS S SVP T+ T + S T TN S + ++ P + T
Sbjct: 30 STSTSASTTPSASSSSETSTSTSVPSTTSSTGTSTSTSTSTNVSTSPVSSSSP----SST 85
Query: 370 CVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSPSKQ-TQLSTNKPT 528
V T+ + ++ + TST ++N + V S SSPS T ST T
Sbjct: 86 LVPTTTTSTTSTTTNTTTTSTTSKNTSTSSVSTTVSSTSSPSTTLTSTSTTNQT 139
>UniRef50_Q1MJP5 Cluster: Putative methyl-accepting chemotaxis
protein precursor; n=1; Rhizobium leguminosarum bv.
viciae 3841|Rep: Putative methyl-accepting chemotaxis
protein precursor - Rhizobium leguminosarum bv. viciae
(strain 3841)
Length = 793
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 285 VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLK 464
V H RED +S+ G NGD+ L+ P D ++R DF++ E L L
Sbjct: 412 VHHAAREDSIKFAVSELGNGLASLSNGDMTIRLEKPFADSLDEIRVDFNASVEKLQAALI 471
Query: 465 SCGEECVI 488
S E +
Sbjct: 472 SFSENAAV 479
>UniRef50_Q1EWZ9 Cluster: Zinc finger, CHC2-type; n=1; Clostridium
oremlandii OhILAs|Rep: Zinc finger, CHC2-type -
Clostridium oremlandii OhILAs
Length = 891
Score = 32.3 bits (70), Expect = 8.7
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +3
Query: 60 HFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 239
H E GD+GA A C+AL K F KGR I ++S S G +++H++ D F+
Sbjct: 275 HHE-GDAGADAFVDKICNALVKKDF---KGR---IYKISCSSLGAKDPSELHILDPDSFS 327
Query: 240 GKKYEDICPSTHNMDV 287
+K++ I +D+
Sbjct: 328 -EKWKVILNEAEEIDI 342
>UniRef50_A0YEH9 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 333
Score = 32.3 bits (70), Expect = 8.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3
Query: 544 NPINAELVYLSRAVFALTAMTHSSPQDF--STVHNNSLPLSKSVRNCVPRSPSGILRSSR 371
NP N + ++ A F T + P +TVH SL + R PR SG L++ R
Sbjct: 175 NPYNIDFSPIADAPFQQTDLVTLDPDSLLKNTVHLGSLDMHNITRAETPRVFSGTLKADR 234
Query: 370 RSPLSAI 350
++ + A+
Sbjct: 235 KADIYAL 241
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,537,341
Number of Sequences: 1657284
Number of extensions: 13233546
Number of successful extensions: 46076
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 42679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45912
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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