Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0022
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089314-1|AAL90052.1|  257|Drosophila melanogaster AT12418p pro...   120   2e-27
AE013599-3497|AAF46923.1|  257|Drosophila melanogaster CG13533-P...   120   2e-27
AY075568-1|AAL68375.1|  806|Drosophila melanogaster SD01878p pro...    33   0.28 
AY052080-1|AAK93504.1|  768|Drosophila melanogaster SD03267p pro...    33   0.28 
AF434685-1|AAL30429.1|  768|Drosophila melanogaster DUNC-115m pr...    33   0.28 
AF434684-1|AAL30428.1|  765|Drosophila melanogaster DUNC-115s pr...    33   0.28 
AF434683-1|AAL30427.1|  806|Drosophila melanogaster DUNC-115l pr...    33   0.28 
AE014297-1009|AAF54427.4|  806|Drosophila melanogaster CG31352-P...    33   0.28 
AE014297-1006|AAF54428.2|  768|Drosophila melanogaster CG31332-P...    33   0.28 
AE014297-1005|AAN13439.2|  749|Drosophila melanogaster CG31332-P...    33   0.28 
AE014297-1004|AAN13438.1|  784|Drosophila melanogaster CG31332-P...    33   0.28 
AE014297-1003|AAN13437.2|  760|Drosophila melanogaster CG31332-P...    33   0.28 
BT011077-1|AAR82743.1|  719|Drosophila melanogaster SD01953p pro...    29   4.5  
AY094941-1|AAM11294.1|  720|Drosophila melanogaster RH56077p pro...    29   4.5  
AE014297-960|AAF54393.1|  720|Drosophila melanogaster CG9379-PA ...    29   4.5  
U50450-1|AAA93470.1|  389|Drosophila melanogaster tyrosine kinas...    29   7.8  

>AY089314-1|AAL90052.1|  257|Drosophila melanogaster AT12418p
           protein.
          Length = 257

 Score =  120 bits (289), Expect = 2e-27
 Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 15/160 (9%)
 Frame = +3

Query: 240 YKFSQDELKVLAECNQESFFQRCLPLGTVLGLGTFAAIQKGHLKPNPRFGPFPKVTLAVV 419
           Y+FS +E+K L ECN ESFFQR LP GT LGL  +  ++ G+L+ + ++G  PKV + V+
Sbjct: 23  YQFSAEEVKALRECNTESFFQRSLPFGTGLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVI 82

Query: 420 VGYFLGKLSYQQACAEKLMALPGSYIGQILRDREE--------WKDWRDFNAST-DPFQC 572
           +GYF+GK SYQQ CAEK+M LP S++G++LR R +          D     A T  PF  
Sbjct: 83  LGYFVGKFSYQQKCAEKIMRLPNSHLGELLRQRRQGGGVISSITPDENLGRAFTLAPFSP 142

Query: 573 TEPLPMIYISDA---GPGSSLDLDT-NRPVFS--EDTYRP 674
           +     +Y  +A   G  +SL+LDT +RP  S  +D YRP
Sbjct: 143 SS--ADVYSDEAYQPGRSTSLNLDTESRPTLSGLDDIYRP 180


>AE013599-3497|AAF46923.1|  257|Drosophila melanogaster CG13533-PA
           protein.
          Length = 257

 Score =  120 bits (289), Expect = 2e-27
 Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 15/160 (9%)
 Frame = +3

Query: 240 YKFSQDELKVLAECNQESFFQRCLPLGTVLGLGTFAAIQKGHLKPNPRFGPFPKVTLAVV 419
           Y+FS +E+K L ECN ESFFQR LP GT LGL  +  ++ G+L+ + ++G  PKV + V+
Sbjct: 23  YQFSAEEVKALRECNTESFFQRSLPFGTGLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVI 82

Query: 420 VGYFLGKLSYQQACAEKLMALPGSYIGQILRDREE--------WKDWRDFNAST-DPFQC 572
           +GYF+GK SYQQ CAEK+M LP S++G++LR R +          D     A T  PF  
Sbjct: 83  LGYFVGKFSYQQKCAEKIMRLPNSHLGELLRQRRQGGGVISSITPDENLGRAFTLAPFSP 142

Query: 573 TEPLPMIYISDA---GPGSSLDLDT-NRPVFS--EDTYRP 674
           +     +Y  +A   G  +SL+LDT +RP  S  +D YRP
Sbjct: 143 SS--ADVYSDEAYQPGRSTSLNLDTESRPTLSGLDDIYRP 180


>AY075568-1|AAL68375.1|  806|Drosophila melanogaster SD01878p
           protein.
          Length = 806

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 543 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 602

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 603 NLDHQKPFYEDEMF 616


>AY052080-1|AAK93504.1|  768|Drosophila melanogaster SD03267p
           protein.
          Length = 768

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 565 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 624

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 625 NLDHQKPFYEDEMF 638


>AF434685-1|AAL30429.1|  768|Drosophila melanogaster DUNC-115m
           protein.
          Length = 768

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 565 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 624

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 625 NLDHQKPFYEDEMF 638


>AF434684-1|AAL30428.1|  765|Drosophila melanogaster DUNC-115s
           protein.
          Length = 765

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 562 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 621

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 622 NLDHQKPFYEDEMF 635


>AF434683-1|AAL30427.1|  806|Drosophila melanogaster DUNC-115l
           protein.
          Length = 806

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 543 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 602

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 603 NLDHQKPFYEDEMF 616


>AE014297-1009|AAF54427.4|  806|Drosophila melanogaster CG31352-PA
           protein.
          Length = 806

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 543 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 602

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 603 NLDHQKPFYEDEMF 616


>AE014297-1006|AAF54428.2|  768|Drosophila melanogaster CG31332-PA,
           isoform A protein.
          Length = 768

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 565 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 624

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 625 NLDHQKPFYEDEMF 638


>AE014297-1005|AAN13439.2|  749|Drosophila melanogaster CG31332-PB,
           isoform B protein.
          Length = 749

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 546 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 605

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 606 NLDHQKPFYEDEMF 619


>AE014297-1004|AAN13438.1|  784|Drosophila melanogaster CG31332-PC,
           isoform C protein.
          Length = 784

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 581 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 640

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 641 NLDHQKPFYEDEMF 654


>AE014297-1003|AAN13437.2|  760|Drosophila melanogaster CG31332-PD,
           isoform D protein.
          Length = 760

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 465 EKLMALPGSYIGQILRDREEWKDWRD-----FNASTDPFQCTEPL-PMIYISDAGPGSSL 626
           EKL +  GS I + L++  +++ W+       NAS  P    EPL  + Y S  G   S 
Sbjct: 557 EKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSR 616

Query: 627 DLDTNRPVFSEDTY 668
           +LD  +P + ++ +
Sbjct: 617 NLDHQKPFYEDEMF 630


>BT011077-1|AAR82743.1|  719|Drosophila melanogaster SD01953p
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 486 GSYIGQILRDREEWKDWRDFNASTDPFQCTEPLPMIYISDAGPGSSLDLDTNRPVFSEDT 665
           G+  GQ   +    +  RD +AST   + T PLP I +    P S +   + + V + +T
Sbjct: 317 GAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNPNT 376


>AY094941-1|AAM11294.1|  720|Drosophila melanogaster RH56077p
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 486 GSYIGQILRDREEWKDWRDFNASTDPFQCTEPLPMIYISDAGPGSSLDLDTNRPVFSEDT 665
           G+  GQ   +    +  RD +AST   + T PLP I +    P S +   + + V + +T
Sbjct: 318 GAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNPNT 377


>AE014297-960|AAF54393.1|  720|Drosophila melanogaster CG9379-PA
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 486 GSYIGQILRDREEWKDWRDFNASTDPFQCTEPLPMIYISDAGPGSSLDLDTNRPVFSEDT 665
           G+  GQ   +    +  RD +AST   + T PLP I +    P S +   + + V + +T
Sbjct: 318 GAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNPNT 377


>U50450-1|AAA93470.1|  389|Drosophila melanogaster tyrosine kinase
           protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 606 AGPGSSLDLDTNRPVFSEDTY 668
           A PG+S+ L TNRP++ E+ +
Sbjct: 5   AQPGASISLSTNRPLYEEEWF 25


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,194,055
Number of Sequences: 53049
Number of extensions: 659748
Number of successful extensions: 2063
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)