Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0022
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.51 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.7  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   6.3  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   6.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   6.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   6.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 309 LPLGTVLGLGTFAAIQKGHLKPNP 380
           +P G  + +GTF   ++ H+ PNP
Sbjct: 434 IPAGCTVVIGTFKLHRQPHIYPNP 457


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 614 WTSIRNIYHW 585
           W  +RNI HW
Sbjct: 219 WRKLRNIVHW 228


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 614 WTSIRNIYHW 585
           W  +RNI HW
Sbjct: 134 WRKLRNIVHW 143


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 614 WTSIRNIYHW 585
           W  +RNI HW
Sbjct: 453 WRKLRNIVHW 462


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 492 SCRAMPSASQHMPAGMTTSPRSSQP 418
           S  A+ S S   P G ++SP  S P
Sbjct: 72  SAAAITSTSPSYPGGGSSSPSPSSP 96


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 627 DLDTNRPVFSEDTYR 671
           DLD N P F++  YR
Sbjct: 194 DLDMNHPGFADKEYR 208


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 392 PNPRFGP 398


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 377 PNPRFGP 383


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 372 PNPRFGP 392
           PNPRFGP
Sbjct: 393 PNPRFGP 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,138
Number of Sequences: 438
Number of extensions: 4131
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)