Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0020
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 378 RYGQEELPIDL 410
           RY QE+LP+DL
Sbjct: 40  RYAQEDLPVDL 50


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 44  YNIFIT*ISVCVIVYITLSHILQNTDYMNIFSLK 145
           Y++FI  ++V +  +I L   LQ   Y+NI  ++
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYCHYLNILRVR 208


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 44  YNIFIT*ISVCVIVYITLSHILQNTDYMNIFSLK 145
           Y++FI  ++V +  +I L   LQ   Y+NI  ++
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYCHYLNILRVR 208


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 111 WRICDNVIYTITQTLIYV 58
           W I    I+T+ +TLIY+
Sbjct: 157 WNILFGHIFTVCRTLIYI 174


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 282 GVPGGLPRAAVP 247
           G PGGL RA VP
Sbjct: 458 GFPGGLGRAVVP 469


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 61  IDKCLCNSIYYIIAYSPEHRLHE 129
           I+  LC  I Y  A   +H+L E
Sbjct: 546 INPSLCTHIIYAFATLKDHKLAE 568


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,083
Number of Sequences: 336
Number of extensions: 3210
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)