Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0019
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.47 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 225 PNSSFKLP*SSLNRTDETPRDSDHTF*FTFTS 130
           P +SFKL  SS +  DE PR    T   TF++
Sbjct: 91  PTTSFKLKDSSSDSEDERPRPGGGTKYQTFSN 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 8   FVQRHLLFL*CLN-FVFHML 64
           F   HLLFL CL+ F  H+L
Sbjct: 188 FFNMHLLFLLCLDYFTLHLL 207


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 275 DIILVIYTNIVFVVN*LNK 331
           D++L IY+ +VF+   +NK
Sbjct: 212 DLVLPIYSQLVFMCKKINK 230


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 379 NMEDKETYKELGNGQRK 429
           N  + E YKE+ NG+RK
Sbjct: 204 NNNNIELYKEIFNGKRK 220


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 582 RCCTEVIAPSTERR 541
           RCC   +AP T+ R
Sbjct: 614 RCCYHAVAPGTDIR 627


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 582 RCCTEVIAPSTERR 541
           RCC   +AP T+ R
Sbjct: 506 RCCYHAVAPGTDIR 519


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 498 LMNLVQLPISSHV*IVSQCLAQLLLYS 578
           L+ ++Q PIS+H   +S+ L  L  YS
Sbjct: 61  LLGIIQFPISAHFSFMSRFLC-LPFYS 86



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 424 SGHFQALYKFLYLPYF 377
           S HF  + +FL LP++
Sbjct: 70  SAHFSFMSRFLCLPFY 85


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 498 LMNLVQLPISSHV*IVSQCLAQLLLYS 578
           L+ ++Q PIS+H   +S+ L  L  YS
Sbjct: 17  LLGIIQFPISAHFSFMSRFLC-LPFYS 42



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 424 SGHFQALYKFLYLPYF 377
           S HF  + +FL LP++
Sbjct: 26  SAHFSFMSRFLCLPFY 41


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 443 ISLIIPPKDQISRVSKMLADEFGTASN 523
           IS   PP   +S++  +  D+F    N
Sbjct: 531 ISFTFPPSPPLSQIHDLSPDQFCNGDN 557


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 715 IKRCVDRLERLKINVHFL 662
           ++RCV  + RL  +VHF+
Sbjct: 364 LERCVKEVLRLYPSVHFI 381


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -2

Query: 645 VTIVPQYITRPFGGTLVYSLSRCCTEVIA 559
           +T + + +   FG TL+  L++C T  ++
Sbjct: 213 LTTMMEMVNDIFGWTLILILAKCITSSLS 241


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 IHQPTSLILSRFD 468
           IHQP+S + S FD
Sbjct: 276 IHQPSSEVYSMFD 288


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 IHQPTSLILSRFD 468
           IHQP+S + S FD
Sbjct: 276 IHQPSSEVYSMFD 288


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 715 IKRCVDRLERLKINVHFL 662
           ++RCV  + RL  +VHF+
Sbjct: 364 LERCVKEVLRLYPSVHFI 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,540
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)