Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0019
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            25   3.1  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    24   5.5  
DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    24   5.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   9.6  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   9.6  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/58 (20%), Positives = 29/58 (50%)
 Frame = -2

Query: 612 FGGTLVYSLSRCCTEVIAPSTERRFTRDLILEAVPNSSANIFDTLEI*SLGGMIRDII 439
           FG  LV++  + C +       RR+    +LE   N + + F  +++ + G ++ +++
Sbjct: 270 FGLALVFTPGKSCGDTHGQVGTRRYMAPEVLEGAINFTRDAFLRIDVYACGLVLWELV 327


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 2   RSFVQRHLLFL*CLNFVFHMLRGNRNKKKSKNPRT 106
           + F  +H++F+     +   +RG R+  K K PR+
Sbjct: 83  KKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRS 117


>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 239 SIRLFKVLVLCKDIILVIYTNIVF 310
           +++LF VL++C  ++L+    + F
Sbjct: 3   TVKLFTVLLICASLMLITEAQLTF 26


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = -2

Query: 621  TRPFGGT-----LVYSLSRCCTEVIAPSTERRFTRDLILEAVPNSSANI 490
            T+P GGT     ++  LSR   E+      RR+ RD+  E       NI
Sbjct: 2932 TQPIGGTKSRGAILLELSRELRELREELEARRYDRDMSTETSKRDIPNI 2980


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 57  TCLGVTEIRKNPRIPAQEEKSEQ 125
           +C+G T + KNPR  + +E   Q
Sbjct: 63  SCIGCTNMLKNPRCRSVKEIGAQ 85


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 715 IKRCVDRLERLKINVHFLLLTFF 647
           + R VDR  ++    HF + TFF
Sbjct: 137 VNRRVDRFSKIYCCCHFSMATFF 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,510
Number of Sequences: 2352
Number of extensions: 14049
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)