Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0015
         (461 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NVM0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.99 
UniRef50_Q4Y8G5 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_Q8I352 Cluster: Putative uncharacterized protein PFI048...    33   2.3  
UniRef50_Q6LF52 Cluster: Putative uncharacterized protein; n=1; ...    32   7.0  

>UniRef50_A6NVM0 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 418

 Score = 34.7 bits (76), Expect = 0.99
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
 Frame = -3

Query: 441 SCTSLMXVVKSNXGLSPDTAQTAFEDISFTGLMRQ-RIVW-CSLKTSQDFQLW*SYFYFV 268
           + + L   V S+   SPD A  ++ D  FTG   + ++VW   +K     ++W    +  
Sbjct: 151 AASPLTATVPSHDDYSPDAAMVSYLD--FTGNSGEPQVVWTAQMKNGDVIRVW-QTLHIT 207

Query: 267 RKVVFSYNYHKIYLNNNEEKSRNKNIIANKTFKKTQL 157
             +   YN+H   +N  EE     + IA++T    Q+
Sbjct: 208 AIITHMYNWHDYPMNTIEELQTLLDQIASETAANDQV 244


>UniRef50_Q4Y8G5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 657

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -3

Query: 309 SQDFQLW*SYFYFVRKVVFSYNYHKIYLNNNEEKSRNKNIIANKTFKKTQLTEKH 145
           + +   W   F  +   +F+Y Y+ ++  NNE++S +K  +AN  F++    + H
Sbjct: 292 NNNISTWDYPFLNLNTNIFNYMYYCVFFKNNEKESSSKKKVANIEFQEKTSFKNH 346


>UniRef50_Q8I352 Cluster: Putative uncharacterized protein PFI0485c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0485c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1114

 Score = 33.5 bits (73), Expect = 2.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 252 SYNYHKIYLNNNEEKSRNKNIIANKTF 172
           +YNYH +Y+N  E+K R  N I N+++
Sbjct: 281 NYNYHGLYINEKEKKDRLNNEIFNESY 307


>UniRef50_Q6LF52 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 819

 Score = 31.9 bits (69), Expect = 7.0
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -3

Query: 282 YFYFVRKVVFSYNYHKIYLNNNE 214
           YFY+++K  FSYN+ K  +NNNE
Sbjct: 610 YFYYLKK--FSYNFLKTLINNNE 630


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,456,988
Number of Sequences: 1657284
Number of extensions: 5244630
Number of successful extensions: 18320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18233
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)