Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0015
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   9.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 75  LCAVYYVYLCIIFMCI 122
           LC  Y+ Y  II +C+
Sbjct: 98  LCTYYFYYAFIILLCV 113



 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 57  CAVLQTLCAVYYVYLCIIF 113
           C ++  LC  Y+ Y  I+F
Sbjct: 230 CVLIILLCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 48  VSTCAVLQTLCAVYYVYLCIIFMCI 122
           + T  +L  LC  Y+    II +CI
Sbjct: 274 IFTMHLLFLLCIYYFYCALIILLCI 298



 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 57  CAVLQTLCAVYYVYLCIIF 113
           CA++  LC  Y+    IIF
Sbjct: 290 CALIILLCIYYFCRAFIIF 308



 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 60  AVLQTLCAVYYVYLCIIF 113
           A +  LC  Y+ Y  IIF
Sbjct: 106 AFIILLCVYYFYYAFIIF 123


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +1

Query: 349 PCERNIFKCSLSGV 390
           PC +N  +C+  G+
Sbjct: 96  PCRKNTGRCAFDGI 109


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 276 YFVRKVVFSYNYHKI 232
           YF+R ++F+   H I
Sbjct: 376 YFLRDIIFAIRQHAI 390


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 276 YFVRKVVFSYNYHKI 232
           YF+R ++F+   H I
Sbjct: 378 YFLRDIIFAIRQHAI 392


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 148 FFGELCFFKGFIC 186
           F+G+ C F G+ C
Sbjct: 368 FYGKNCEFSGYDC 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,753
Number of Sequences: 336
Number of extensions: 1623
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)