Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0011
         (418 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           27   0.27 
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    27   0.27 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   1.9  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    24   2.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
 Frame = +1

Query: 157 VPTPSNNKDGSTISELPENWDQTKDDN-RSLFLNKSDK-----NDLEPYPLALSEEGNQD 318
           VP   +  D S I +LP  W++    N R+ ++N   K        EP    + + GN +
Sbjct: 148 VPEDDDAADESMIHQLPRGWEERSAQNGRTYYVNHYTKTTQWSRPTEPAGPPVRQSGNNN 207

Query: 319 GYDQTVDQRFDSPQSNGELGNLIMRPELYGEP 414
             + +     +   + G + +   +  + G P
Sbjct: 208 AANSSTPLTVNGTVNGGGVPHPQQQQHILGSP 239


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 124 TAITAVLAVSAVPTPSNNKDGSTISELPENW--DQTKDDNRSLFLNKSDKND 273
           T + A+L     PT     DG T+ +LPEN+  D+ K   +SL    S + D
Sbjct: 5   TKLLALLQRPLEPTFYPKDDGKTVVDLPENYLTDRYKPIGQSLQTRFSSEAD 56


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 9   ITNASGVPPEHHILRDLFILFYCPSTILTDRDYVIIF 119
           I ++SGVP   +I   LFILF    T+    D + +F
Sbjct: 737 IVSSSGVPQGSNIGPLLFILFINDVTLALPPDSISLF 773


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 265 KNDLEPYPLALSEEGNQDGYDQTVD 339
           K  +E + L   +EG  DGYD+ ++
Sbjct: 101 KEVMEKFGLLTPKEGYWDGYDENIN 125


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +1

Query: 151  SAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDG 321
            S+  T +NN+DG  I++  ++ D T     S  L  +   DL+P    +  EG+  G
Sbjct: 3051 SSTTTTTNNRDGGLIAD-SQSADLTL---TSCTLADAGSVDLQPPATPVGREGSGIG 3103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,410
Number of Sequences: 2352
Number of extensions: 8386
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)