Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0011
(418 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein tr... 29 1.9
AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-P... 29 1.9
AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p pro... 29 3.3
M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate rece... 28 4.3
BT003218-1|AAO24973.1| 726|Drosophila melanogaster RE03717p pro... 28 4.3
AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA... 28 4.3
U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein. 28 5.7
U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein. 28 5.7
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 28 5.7
AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB... 28 5.7
AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA... 28 5.7
BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p pro... 27 7.6
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 27 7.6
BT009960-1|AAQ22429.1| 945|Drosophila melanogaster RH16520p pro... 27 7.6
AY118356-1|AAM48385.1| 1031|Drosophila melanogaster RE02873p pro... 27 7.6
AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquit... 27 7.6
AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-pr... 27 7.6
AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin... 27 7.6
AE014298-2599|AAS65394.1| 1031|Drosophila melanogaster CG32556-P... 27 7.6
AE014298-2598|AAF48755.2| 1359|Drosophila melanogaster CG32556-P... 27 7.6
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 27 7.6
AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA... 27 7.6
AY119636-1|AAM50290.1| 620|Drosophila melanogaster RE43020p pro... 27 10.0
AY089463-1|AAL90201.1| 463|Drosophila melanogaster AT27178p pro... 27 10.0
AE014297-3667|AAF56363.1| 463|Drosophila melanogaster CG10845-P... 27 10.0
AE014296-619|AAF47751.2| 594|Drosophila melanogaster CG12017-PA... 27 10.0
>AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein
transcript A protein.
Length = 587
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 115 FSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 294
++ TA+TA +P PS + EL + DD SL LN +
Sbjct: 493 YASTALTANATAPPLP-PSTDSSEPIYQELDQQ-RLIIDDKYSLPLNSDEDPPYSEPSNM 550
Query: 295 LSEEGNQDGYDQTVDQRFDSPQSN 366
+SE GN Y+ T ++ + S QSN
Sbjct: 551 MSEYGNDYNYNGT-NESYTSEQSN 573
>AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-PB,
isoform B protein.
Length = 700
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 115 FSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 294
++ TA+TA +P PS + EL + DD SL LN +
Sbjct: 606 YASTALTANATAPPLP-PSTDSSEPIYQELDQQ-RLIIDDKYSLPLNSDEDPPYSEPSNM 663
Query: 295 LSEEGNQDGYDQTVDQRFDSPQSN 366
+SE GN Y+ T ++ + S QSN
Sbjct: 664 MSEYGNDYNYNGT-NESYTSEQSN 686
>AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p
protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 145 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLN---KSDKNDLEPYPLALSEEGNQ 315
A + P NN D + +N DD+ L+ ++D D EP SEE +Q
Sbjct: 268 AAQSAPATDNNDDDDDDDDQDKNDADDGDDDEFESLDQQFENDPEDTEPAKAVESEEQDQ 327
Query: 316 DGYDQ 330
D D+
Sbjct: 328 DQADE 332
>M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate
receptor subunit kainatesubtype protein.
Length = 991
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLDCGESKRWSTVW 327
GGS SS S+ LDC SK W T W
Sbjct: 365 GGSSSSSATGTNESSALLDCNTSKGWVTPW 394
>BT003218-1|AAO24973.1| 726|Drosophila melanogaster RE03717p
protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLDCGESKRWSTVW 327
GGS SS S+ LDC SK W T W
Sbjct: 100 GGSSSSSATGTNESSALLDCNTSKGWVTPW 129
>AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA
protein.
Length = 991
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLDCGESKRWSTVW 327
GGS SS S+ LDC SK W T W
Sbjct: 365 GGSSSSSATGTNESSALLDCNTSKGWVTPW 394
>U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.
Length = 1526
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLD 360
GG P SGL RLPS P D
Sbjct: 598 GGKPLDSGLQARLPSQPRD 616
>U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein.
Length = 1375
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLD 360
GG P SGL RLPS P D
Sbjct: 447 GGKPLDSGLQARLPSQPRD 465
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 181 DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGN 312
DG + EN + DDN+ L L ++ LE Y L E GN
Sbjct: 2785 DGDVDALWIENMNSVMDDNKLLTLANGERIRLENYCALLFEVGN 2828
>AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB,
isoform B protein.
Length = 1375
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLD 360
GG P SGL RLPS P D
Sbjct: 447 GGKPLDSGLQARLPSQPRD 465
>AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA,
isoform A protein.
Length = 1526
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 416 GGSP*SSGLMIRLPSSPLD 360
GG P SGL RLPS P D
Sbjct: 598 GGKPLDSGLQARLPSQPRD 616
>BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p
protein.
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDN-RSLFLNKSDKN 270
++D S+ LPE W++ + DN R ++N + K+
Sbjct: 160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKS 192
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p protein.
Length = 1288
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 118 SLTAITAVLAVSAVPTPSNNK-DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 294
S A A +A S P P NN+ + S S + + T N++ + ++ E L
Sbjct: 831 SAAAAAAAVAASNAPNPGNNREESSDESTITSSQTSTLTRNQAPCMELQEQMAAELLGLG 890
Query: 295 -LSEEGNQDGYDQTVDQRFDSPQSNGELG 378
L+E D D ++ D Q ++G
Sbjct: 891 PLNEPECSDDDDDDEEEELDDKQLVSDVG 919
>BT009960-1|AAQ22429.1| 945|Drosophila melanogaster RH16520p
protein.
Length = 945
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 154 AVPTPSNNKDGSTISELPENWDQTKDDNRSL 246
A T +KDG T E P +WD D R L
Sbjct: 332 AAETTQMDKDGPTDLERPGDWDSLSDRMRKL 362
>AY118356-1|AAM48385.1| 1031|Drosophila melanogaster RE02873p
protein.
Length = 1031
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 154 AVPTPSNNKDGSTISELPENWDQTKDDNRSL 246
A T +KDG T E P +WD D R L
Sbjct: 4 AAETTQMDKDGPTDLERPGDWDSLSDRMRKL 34
>AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquitin
E3 ligase Smurf1 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDN-RSLFLNKSDKN 270
++D S+ LPE W++ + DN R ++N + K+
Sbjct: 160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKS 192
>AF416571-1|AAL09691.1| 1061|Drosophila melanogaster
ubiquitin-protein ligase protein.
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDN-RSLFLNKSDKN 270
++D S+ LPE W++ + DN R ++N + K+
Sbjct: 160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKS 192
>AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin
ligase protein.
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDN-RSLFLNKSDKN 270
++D S+ LPE W++ + DN R ++N + K+
Sbjct: 160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKS 192
>AE014298-2599|AAS65394.1| 1031|Drosophila melanogaster CG32556-PB,
isoform B protein.
Length = 1031
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 154 AVPTPSNNKDGSTISELPENWDQTKDDNRSL 246
A T +KDG T E P +WD D R L
Sbjct: 4 AAETTQMDKDGPTDLERPGDWDSLSDRMRKL 34
>AE014298-2598|AAF48755.2| 1359|Drosophila melanogaster CG32556-PA,
isoform A protein.
Length = 1359
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 154 AVPTPSNNKDGSTISELPENWDQTKDDNRSL 246
A T +KDG T E P +WD D R L
Sbjct: 332 AAETTQMDKDGPTDLERPGDWDSLSDRMRKL 362
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 118 SLTAITAVLAVSAVPTPSNNK-DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 294
S A A +A S P P NN+ + S S + + T N++ + ++ E L
Sbjct: 831 SAAAAAAAVAASNAPNPGNNREESSDESTITSSQTSTLTRNQAPCMELQEQMAAELLGLG 890
Query: 295 -LSEEGNQDGYDQTVDQRFDSPQSNGELG 378
L+E D D ++ D Q ++G
Sbjct: 891 PLNEPECSDDDDDDEEEELDDKQLVSDVG 919
>AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA
protein.
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDN-RSLFLNKSDKN 270
++D S+ LPE W++ + DN R ++N + K+
Sbjct: 160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKS 192
>AY119636-1|AAM50290.1| 620|Drosophila melanogaster RE43020p
protein.
Length = 620
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +1
Query: 145 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY 324
A +A N +D + E+ D+ ++D+R + SD + E D
Sbjct: 186 ASNAAEEEDNAEDEDADANNEED-DEEEEDDRDEEDDDSDSTAEQDQDQDHEPEAEADNE 244
Query: 325 DQTVDQRFDSPQSNGELGN 381
D+ VD+ +P+S+ E N
Sbjct: 245 DEDVDEAVSAPESDNEKEN 263
>AY089463-1|AAL90201.1| 463|Drosophila melanogaster AT27178p
protein.
Length = 463
Score = 27.1 bits (57), Expect = 10.0
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Frame = +1
Query: 148 VSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKS-----DKNDLEPYPLAL----- 297
V+ PTPS+N + S E+ + + NK+ DK +LE + +L
Sbjct: 248 VTPAPTPSSNSNASLPDEVWRRLLRQERAKYRCLRNKALGIVVDKEELERFLESLEASDS 307
Query: 298 SEEGNQDG-YDQTVDQRFDSPQSNGEL 375
SEE DG ++Q V+Q+ + +S E+
Sbjct: 308 SEEDISDGDFEQKVEQKMLAIRSEAEM 334
>AE014297-3667|AAF56363.1| 463|Drosophila melanogaster CG10845-PA
protein.
Length = 463
Score = 27.1 bits (57), Expect = 10.0
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Frame = +1
Query: 148 VSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKS-----DKNDLEPYPLAL----- 297
V+ PTPS+N + S E+ + + NK+ DK +LE + +L
Sbjct: 248 VTPAPTPSSNSNASLPDEVWRRLLRQERAKYRCLRNKALGIVVDKEELERFLESLEASDS 307
Query: 298 SEEGNQDG-YDQTVDQRFDSPQSNGEL 375
SEE DG ++Q V+Q+ + +S E+
Sbjct: 308 SEEDISDGDFEQKVEQKMLAIRSEAEM 334
>AE014296-619|AAF47751.2| 594|Drosophila melanogaster CG12017-PA
protein.
Length = 594
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +1
Query: 145 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY 324
A +A N +D + E+ D+ ++D+R + SD + E D
Sbjct: 186 ASNAAEEEDNAEDEDADANNEED-DEEEEDDRDEEDDDSDSTAEQDQDQDHEPEAEADNE 244
Query: 325 DQTVDQRFDSPQSNGELGN 381
D+ VD+ +P+S+ E N
Sbjct: 245 DEDVDEAVSAPESDNEKEN 263
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,351,759
Number of Sequences: 53049
Number of extensions: 380451
Number of successful extensions: 1232
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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