Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0009
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 101 4e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 73 2e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 73 2e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 2e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 72 5e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 72 5e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 72 5e-13
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 40 0.002
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.002
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.002
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.017
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.039
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.16
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.28
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 32 0.37
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.48
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.48
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.64
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 2.0
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 2.0
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.6
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.6
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.5
AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical... 29 4.5
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 4.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.5
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 4.5
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 6.0
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 6.0
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 101 bits (243), Expect = 4e-22
Identities = 58/159 (36%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD---- 293
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 294 --------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNC 449
CY C G GH +R+C PS + +G E GR Q CYNC
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNC 112
Query: 450 NKSGHISRNCPDG----TKTCYVCGKPGHISRECDEARN 554
+SGHISR C + K CY C + GHISR+C N
Sbjct: 113 GRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 6e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = +3
Query: 288 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 434
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 435 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 536
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 537 CDEARN*PQPPC 572
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 311
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 312 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 482
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 483 DGTK 494
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 237 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 401
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 402 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 539
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +3
Query: 249 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 422
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 423 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 572
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 302
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 303 RCNGTGHIARECAQSPDE 356
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 498 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 590
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 311
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 312 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 482
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 483 DGTK 494
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 237 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 401
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 402 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 539
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +3
Query: 249 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 422
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 423 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 572
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 302
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 303 RCNGTGHIARECAQSPDE 356
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 498 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 590
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 213 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 371
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 372 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 521
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 522 HISREC 539
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 317
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 318 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 449
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 450 NKSGHISRNCPDGTK 494
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 236
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 498 CYVCGKPGHISRECDEARN*PQP 566
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 213 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 371
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 372 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 521
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 522 HISREC 539
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 317
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 318 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 449
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 450 NKSGHISRNCPDGTK 494
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 236
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 498 CYVCGKPGHISRECDEARN*PQP 566
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +3
Query: 213 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 371
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 372 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 521
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 522 HISREC 539
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 317
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 318 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 449
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 450 NKSGHISRNCPDGTK 494
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 236
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 498 CYVCGKPGHISRECDEARN*PQP 566
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 368
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 369 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 539
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 303 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 407
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 314
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 315 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 434
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 435 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 317
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 318 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 455
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 456 SGHISRNCPDGTK 494
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 411 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 545
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 344
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 456 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 566
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 368
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 369 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 539
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 303 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 407
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 314
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 315 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 434
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 435 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 317
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 318 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 455
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 456 SGHISRNCPDGTK 494
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 411 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 545
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 344
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 456 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 566
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 368
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 369 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 539
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 303 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 407
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 314
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 315 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 434
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 435 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 317
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 318 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 455
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 456 SGHISRNCPDGTK 494
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 411 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 545
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 551
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 225 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 344
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 456 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 566
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = +3
Query: 189 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 359
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 360 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCG 512
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 513 KPGHISRECDE 545
H+ R+C E
Sbjct: 314 ANTHLRRDCPE 324
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 296
++ S C+ C GH +C + S D CFKC H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 297 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 428
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 521
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 522 HISRECDEARN 554
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 48.4 bits (110), Expect = 5e-06
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +3
Query: 144 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 323
+ C R H + +C + V+ F + K CN H C E D + C G H
Sbjct: 386 HNCERICH-SGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHH 443
Query: 324 IARECAQSPDEPSCYNCNKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKT 497
++C + C C + R CP G +S T C + D T
Sbjct: 444 CTKKC----HDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLT 499
Query: 498 CYVCGKPGHISRECDEARN*PQPPC 572
C GK H +C E P PPC
Sbjct: 500 CGTPGKNHHCREKCHEG---PCPPC 521
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = -3
Query: 489 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRA 328
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 327 LCAPCRYICSNGQPLPCNPSQSVLCGC 247
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 405 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 566
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 234 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 344
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 405 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 566
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 234 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 344
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 405 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 566
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 234 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 344
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 405 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 566
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 234 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 344
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 429 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 569
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 341
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 443
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 429 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 569
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 341
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 443
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 342 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 518
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 519 GHISREC 539
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 231 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 395
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 396 RNCPE 410
NCP+
Sbjct: 688 WNCPK 692
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 132 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 308
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 309 NGTGHIARECAQSPDEPS 362
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 342 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 518
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 519 GHISREC 539
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 231 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 395
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 396 RNCPE 410
NCP+
Sbjct: 591 WNCPK 595
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 132 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 308
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 309 NGTGHIARECAQSPDEPS 362
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 342 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 518
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 519 GHISREC 539
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +3
Query: 231 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 395
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 396 RNCPE 410
NCP+
Sbjct: 602 WNCPK 606
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 132 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 308
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 309 NGTGHIARECAQSPDEPS 362
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPC 313
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 312 RYICSNGQPLPCNPSQSVLCGCT 244
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 311
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 312 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 467
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 468 ----SRNCPDGTKTCYVC 509
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 159 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 323
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 324 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 491
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 492 KTC 500
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 311
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 312 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 467
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 468 ----SRNCPDGTKTCYVC 509
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 159 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 323
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 324 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 491
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 492 KTC 500
C
Sbjct: 2005 GGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 311
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 312 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 467
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 468 ----SRNCPDGTKTCYVC 509
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 159 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 323
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 324 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 491
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 492 KTC 500
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 311
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 312 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 467
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 468 ----SRNCPDGTKTCYVC 509
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 159 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 323
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 324 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 491
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 492 KTC 500
C
Sbjct: 2005 GGC 2007
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 536
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 537 C 539
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 267 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 446
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 447 CNKSGHISRNCPDG 488
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 401
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 402 CPEGGRESATQTCY 443
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +3
Query: 99 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK------- 236
A +KP + C+ C+ GH A C +R + + R +K
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVT 251
Query: 237 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 335
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 479
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 413
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 539
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 479
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 413
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 539
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 432 QTCYNCNKSGHISRNCPDG 488
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEG 413
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQG 191
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.85
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 492 KTCYVCGKPGHISREC 539
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 326
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +3
Query: 174 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 353
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 354 E----PSCYNCNKTGHIARNCPEGGRESATQTCYNCN--KSGHISRNCPDG 488
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 461
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 357 PSCYNCNKTGHIARNCPEGGRES 425
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGT 491
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 233
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 476
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 476
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -3
Query: 486 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 328
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 327 LCAPCRYICSNGQPLP 280
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/112 (22%), Positives = 37/112 (33%)
Frame = -3
Query: 477 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 298
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 297 NGQPLPCNPSQSVLCGCT*STSHVADXXXXXXXXXXXACIRARNARSGCTCS 142
+G C+ S S L C + C + S C+CS
Sbjct: 232 SGCRSTCS-STSTLSVCIPACQQTCRSTCSTAKTFVIPCTSGTSGNS-CSCS 281
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Frame = -3
Query: 477 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 313
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 312 RYICSNGQPLPCNPSQSVLCGC 247
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 324 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 488
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +3
Query: 174 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 353
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 354 EPSCYNCNKTGHIARNCPEGG 416
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCKEEADR 296
C++C+R GHF C Q + +R + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 32.3 bits (70), Expect = 0.37
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 392 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 568
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 569 LSPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCRAASAPQ-TEK 700
LS L S YI R +K+R + +Y A P TEK
Sbjct: 703 LSNLPS--YI--NRRMEKEREREIEYRRDREYSMPPADPPVITEK 743
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 348 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 482
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +3
Query: 132 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 296
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 410
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +3
Query: 135 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 309 NGTGH 323
G H
Sbjct: 371 KGNHH 375
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +3
Query: 363 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 515
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 516 PGHISREC 539
H + C
Sbjct: 372 GNHHTVFC 379
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 474 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 316
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -3
Query: 477 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 316
S +C TC S S+ TP P + V+C PSC +C + P +V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 315 CRYICSNGQPL-PCNPSQSVLC 253
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -3
Query: 459 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 307
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 306 --ICSNGQPLPCNPSQ 265
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = -3
Query: 474 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 316
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 315 CRYICSNGQPLPCNP 271
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = -3
Query: 477 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 316
S +C TC S S+ TP P + V+C PSC +C + P V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 315 CRYICSNGQPL-PCNPSQSVLC 253
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 480 PD-GTKTCYVCGKPGHISRECDEAR 551
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 480 PD-GTKTCYVCGKPGHISRECDEAR 551
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 480 PD-GTKTCYVCGKPGHISRECDEAR 551
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = -3
Query: 468 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 298
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 297 NGQPL-PCNPSQSVLC 253
N Q + C PS C
Sbjct: 352 NAQCVQACLPSCESSC 367
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 248
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 222 RQREKCFKCNRTGHFARDCKEEA 290
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 459 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 328
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGTKTCYVC 509
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 438 CYNCNKSGHISRNCP 482
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPE 410
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 267 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 410
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGTKTCYVC 509
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = +3
Query: 306 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 485
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 486 GTKTCYVCGKPGHISR 533
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = -3
Query: 477 SCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRAL 325
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 324 CAPCRYICSNGQPLPCNPSQS 262
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 389
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 447 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 548
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 548
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 447 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 548
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 548
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical
protein Y113G7B.24 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 389 HRTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVLRVRQARPHL---ARVRRGAELA 559
HR EL R G D LQ++ + +H+ R + + L + ++ E A
Sbjct: 80 HRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKK--RKEEGKSDLLSESEMKFAEEYA 137
Query: 560 AATLSPLQSTMYIMMPRTDDKQRTPRATHDNRLQY 664
A + Q T+ MP K PR HD+ + Y
Sbjct: 138 LAESNLFQKTVLEFMPAALKKMPVPRGDHDDVMVY 172
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 317
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 318 GHIARECAQSPDEPS 362
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 498 CYVCGKPGHISREC 539
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 548
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -3
Query: 486 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 313
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 312 RYICSNG 292
+ CS G
Sbjct: 148 Q--CSEG 152
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 414 GRESATQTCYNCNKSGHISRNCP 482
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 414 GRESATQTCYNCNKSGHISRNCP 482
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 402 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 554
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 474 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 388
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,091
Number of Sequences: 27780
Number of extensions: 359258
Number of successful extensions: 1852
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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