Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0004
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical pr... 121 1e-28
AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1 ... 121 1e-28
Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical p... 120 4e-28
AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2 ... 120 4e-28
Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical po... 70 6e-13
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 70 6e-13
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 70 6e-13
Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical pr... 70 6e-13
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 70 6e-13
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 70 6e-13
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 70 6e-13
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 32 0.15
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.35
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 29 1.1
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 29 1.1
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 1.9
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 27 4.4
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 27 4.4
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 5.8
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 5.8
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 27 5.8
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 27 5.8
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 26 7.6
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 26 7.6
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 26 7.6
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 26 7.6
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 26 7.6
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 26 7.6
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 26 7.6
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 26 7.6
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 26 7.6
>Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical
protein R06C7.3 protein.
Length = 489
Score = 121 bits (292), Expect = 1e-28
Identities = 58/123 (47%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Frame = +1
Query: 10 GRIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMM 189
G +VN+DG+ +ADV + +GII +V N+ T IDA +LV+PGGIDPHTH ++ M
Sbjct: 10 GTVVNEDGMFKADVLVRNGIIVEVSPNITALPDTEVIDATDRLVIPGGIDPHTHMQMPYM 69
Query: 190 GAKTADDFYKXXXXXXXXXXXXIIDFVLPE--KGQSLLEAYANWREKADNKVCCDYGLHV 363
G T DDF K IIDF P+ G+SL+ Y WR AD KVCCDYGL V
Sbjct: 70 GEVTKDDFLKGTEAAVAGGTTMIIDFCCPDHRNGESLIAGYNRWRSWADPKVCCDYGLSV 129
Query: 364 GVT 372
+T
Sbjct: 130 AIT 132
>AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1
protein.
Length = 489
Score = 121 bits (292), Expect = 1e-28
Identities = 58/123 (47%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Frame = +1
Query: 10 GRIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMM 189
G +VN+DG+ +ADV + +GII +V N+ T IDA +LV+PGGIDPHTH ++ M
Sbjct: 10 GTVVNEDGMFKADVLVRNGIIVEVSPNITALPDTEVIDATDRLVIPGGIDPHTHMQMPYM 69
Query: 190 GAKTADDFYKXXXXXXXXXXXXIIDFVLPE--KGQSLLEAYANWREKADNKVCCDYGLHV 363
G T DDF K IIDF P+ G+SL+ Y WR AD KVCCDYGL V
Sbjct: 70 GEVTKDDFLKGTEAAVAGGTTMIIDFCCPDHRNGESLIAGYNRWRSWADPKVCCDYGLSV 129
Query: 364 GVT 372
+T
Sbjct: 130 AIT 132
>Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical
protein C47E12.8 protein.
Length = 520
Score = 120 bits (288), Expect = 4e-28
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +1
Query: 10 GRIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMM 189
G IVNDD I ++DV + DG I ++ ++ G +DA +LV+PGGIDPHTH +L M
Sbjct: 8 GTIVNDDAIFKSDVLVLDGRIVEIAPSIQPTPGLEVVDATDRLVIPGGIDPHTHMQLPFM 67
Query: 190 GAKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNKVCCDYGLHVGV 369
G DDF++ IIDFV+P KG+SLL AY WR AD KV CDYGL + +
Sbjct: 68 GEIAKDDFHRGTEAAVAGGTTMIIDFVIPTKGESLLVAYDRWRGWADPKVVCDYGLSMAI 127
Query: 370 T 372
T
Sbjct: 128 T 128
>AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2
protein.
Length = 520
Score = 120 bits (288), Expect = 4e-28
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +1
Query: 10 GRIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMM 189
G IVNDD I ++DV + DG I ++ ++ G +DA +LV+PGGIDPHTH +L M
Sbjct: 8 GTIVNDDAIFKSDVLVLDGRIVEIAPSIQPTPGLEVVDATDRLVIPGGIDPHTHMQLPFM 67
Query: 190 GAKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNKVCCDYGLHVGV 369
G DDF++ IIDFV+P KG+SLL AY WR AD KV CDYGL + +
Sbjct: 68 GEIAKDDFHRGTEAAVAGGTTMIIDFVIPTKGESLLVAYDRWRGWADPKVVCDYGLSMAI 127
Query: 370 T 372
T
Sbjct: 128 T 128
>Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical
polypeptide III protein.
Length = 523
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 10 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 64
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 65 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 124
Query: 370 T 372
T
Sbjct: 125 T 125
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 166 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 220
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 221 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 280
Query: 370 T 372
T
Sbjct: 281 T 281
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 341 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 395
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 396 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 455
Query: 370 T 372
T
Sbjct: 456 T 456
>Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical
protein.
Length = 523
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 10 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 64
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 65 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 124
Query: 370 T 372
T
Sbjct: 125 T 125
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 166 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 220
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 221 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 280
Query: 370 T 372
T
Sbjct: 281 T 281
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 341 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 395
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 396 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 455
Query: 370 T 372
T
Sbjct: 456 T 456
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 RIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMG 192
+IVNDD I AD+ IEDGII+ V NL P G +DAAGKL +P GID +T +
Sbjct: 341 QIVNDDAIFVADILIEDGIIQNVAPNLEAPEGAEVLDAAGKLALPAGIDVYT-----QVT 395
Query: 193 AKTADDFYKXXXXXXXXXXXXIIDFVLPEKGQSLLEAYANWREKADNK-VCCDYGLHVGV 369
+ DD I++ V P +S++ A + + + + C L V +
Sbjct: 396 DSSVDDLSTGCKSAIAGGTGTIVEVVRPRGAESVVSAVKRVKNQLEKSGISCHVALSVAI 455
Query: 370 T 372
T
Sbjct: 456 T 456
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQ 101
P C + Q +PS P +C C + PVCQ+ S CLQ
Sbjct: 334 PQCQQQCAPQCYQPSAPQCQQCQNTCQQFAPVCQQQCASQCLQ 376
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQ 101
P C + Q +P+ P +C C + PVC++ S+C Q
Sbjct: 364 PVCQQQCASQCLQPAAPQCQQCQNTCQQFAPVCEQQCASLCHQ 406
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.35
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 98
P C + Q +PS P +C C +A PVCQ+ C Q+
Sbjct: 244 PQCQQQCAPQCQQPSAPQCQQCQNTCQQAAPVCQQQCAPQCQQQ 287
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.35
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 98
P C + Q +PS P +C C +A PVCQ+ C Q+
Sbjct: 244 PQCQQQCAPQCQQPSAPQCQQCQNTCQQAAPVCQQQCAPQCQQQ 287
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 90 PHHSW--RHTDHRCRWQTGHARGHRPPHSLRAGNDGR*NCR*LLQGHPG 230
PHH R H R Q GH H PP+ R N + R +QG G
Sbjct: 40 PHHGGMNRMMPHGFRPQQGHHPSHMPPYGQRGNNQNQYGNR--MQGGQG 86
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 40 EADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHT 168
+A V ++ I ++GRN+++ GG A L G +D H+
Sbjct: 103 KAAVAADNEICSEIGRNILLKGGNAVDSAIAALFCIGVMDTHS 145
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 98
P C + Q +P+ P +C C ++ PVCQ+ C Q+
Sbjct: 66 PQCQQQCAPQCQQPAAPQCQQCQNTCQQSAPVCQQQCAPQCQQQ 109
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 100 PGGTRTIDAAGKLVMPGGIDPH 165
PG T D +GKL++ G++P+
Sbjct: 1088 PGNEATTDGSGKLILCNGLEPN 1109
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 100 PGGTRTIDAAGKLVMPGGIDPH 165
PG T D +GKL++ G++P+
Sbjct: 1185 PGNEATTDGSGKLILCNGLEPN 1206
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVC 107
P C + Q +PS P +C C + PVCQ+ C
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQC 197
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVC 107
P C + Q +PS P +C C + PVCQ+ C
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQC 197
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 37 EEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHT 168
++A V + G+ ++GR+++I GG L+ G ++P +
Sbjct: 73 KKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQS 116
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 37 EEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHT 168
++A V + G+ ++GR+++I GG L+ G ++P +
Sbjct: 103 KKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQS 146
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 848 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 891
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 842 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 885
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 848 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 891
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 842 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 885
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 125
P C + Q +PS P +C C + PVCQ+
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 191
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 125
P C + Q +PS P +C C + PVCQ+
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 191
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 842 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 885
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 67 IIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAK 198
+I+ V ++ P GT + AGK P + P H +L+ +GA+
Sbjct: 848 LIEDVVESMGPPDGTIIVSIAGKPRFPPQMFPPIHEKLKELGAQ 891
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 229 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 125
P C + Q +PS P +C C + PVCQ+
Sbjct: 381 PECQQQCAPQCQQPSAPQCQQCQNTCQQFAPVCQQ 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,854,912
Number of Sequences: 27780
Number of extensions: 193618
Number of successful extensions: 492
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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