Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0003
(317 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q028U7 Cluster: Putative uncharacterized protein; n=1; ... 34 0.53
UniRef50_A7BCX0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_Q9VS05 Cluster: CG18647-PA; n=3; Drosophila melanogaste... 33 1.6
UniRef50_Q8RV13 Cluster: Putative uncharacterized protein OSJNBa... 32 2.1
UniRef50_A1IT02 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_UPI00006CBEDA Cluster: hypothetical protein TTHERM_0030... 31 5.0
UniRef50_Q8F8H7 Cluster: Carbonic anhydrase; n=13; Bacteria|Rep:... 31 5.0
UniRef50_P37516 Cluster: Uncharacterized protein yyaH; n=28; Bac... 31 5.0
UniRef50_UPI0000DB6E7E Cluster: PREDICTED: similar to CG40191-PB... 31 6.6
UniRef50_Q58EI6 Cluster: Impa1 protein; n=4; Clupeocephala|Rep: ... 31 6.6
UniRef50_Q4SGD7 Cluster: Chromosome 17 SCAF14597, whole genome s... 31 6.6
UniRef50_A0JYJ2 Cluster: Putative uncharacterized protein precur... 31 6.6
UniRef50_Q9S9J5 Cluster: T23K8.6; n=2; Arabidopsis thaliana|Rep:... 31 6.6
UniRef50_O59826 Cluster: Potassium channel subunit; n=9; cellula... 31 6.6
UniRef50_A4R7R7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q1IUY5 Cluster: Periplasmic sensor signal transduction ... 30 8.7
UniRef50_A7CH02 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A3VN11 Cluster: TraH; n=1; Parvularcula bermudensis HTC... 30 8.7
UniRef50_Q2QLK8 Cluster: Expressed protein; n=2; Oryza sativa|Re... 30 8.7
UniRef50_P59047 Cluster: NACHT, LRR and PYD domains-containing p... 30 8.7
>UniRef50_Q028U7 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 421
Score = 34.3 bits (75), Expect = 0.53
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 87 RAMDPFLH*SPTPCRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNP 266
R M F++ +PTP + MNGG PA N TP E AE G+P
Sbjct: 187 RRMKVFVNDAPTPTLEVGRLEGDAMNGGLHLKGPATFAN--MVITPGAVEGLSAEAAGDP 244
Query: 267 ITGDG 281
+ GDG
Sbjct: 245 LDGDG 249
>UniRef50_A7BCX0 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 655
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 120 TPCRSNIQFGDSEMN-GGSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNPITGDGYKSM 293
TP +N GD + G P +PA ++ +A S P+ G +PA P GDG S+
Sbjct: 492 TPALAN---GDENPSVGQEPGQTPAPSVSSAAPSAPANGGGDPASEPSAPANGDGNPSV 547
>UniRef50_Q9VS05 Cluster: CG18647-PA; n=3; Drosophila
melanogaster|Rep: CG18647-PA - Drosophila melanogaster
(Fruit fly)
Length = 676
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +3
Query: 114 SPTPCRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNPITGDGYKSM 293
SP+ SN G +N S + SPAK +NGS S PS+ E G+ + G G S
Sbjct: 234 SPSQVISNAH-GMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVS-GSAVVGTGGSSQ 291
Query: 294 NGQMNT 311
+T
Sbjct: 292 QDAPST 297
>UniRef50_Q8RV13 Cluster: Putative uncharacterized protein
OSJNBa0026J14.3; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0026J14.3 - Oryza sativa subsp. japonica (Rice)
Length = 184
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = -1
Query: 242 LPLTSTGCRISASVHHLGGRVRRTSAVHFRITKLDVTAAWCR*SMEKRVHCSLPVRKVSS 63
+PL S C++ A+ H GG +RR + + AAW R +R S R + S
Sbjct: 1 MPLWSCRCKLDAAGFHGGGDIRRRDEELDGVRSWEKDAAWSRRQRRRRRRQSQSPRGLES 60
Query: 62 ECHADVSVCRGRRVGA 15
A + R RR+ A
Sbjct: 61 -ATAALLAWRQRRIPA 75
>UniRef50_A1IT02 Cluster: Putative uncharacterized protein; n=1;
Neisseria meningitidis serogroup A|Rep: Putative
uncharacterized protein - Neisseria meningitidis
serogroup A
Length = 803
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 178 VGLPPFISESPNWMLLRHGVGDQWRNGSIARCLSEKSRVSVTRTCRCVADD 26
+G F++ W L HGV D RN + + ++R+ +T R + D
Sbjct: 548 IGADEFLNGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKTMREASSD 598
>UniRef50_UPI00006CBEDA Cluster: hypothetical protein TTHERM_00305400;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00305400 - Tetrahymena thermophila SB210
Length = 2486
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -3
Query: 255 SVRLAPSHLDWVSNKRFRSSSWRESA*DFRRSFQNHQTGCYCGMVSVINGETGPLL 88
SV+ + + L++ N+ + S ++ D + S QN+ T CY G S+ NG+T LL
Sbjct: 1029 SVQFSLNSLNYF-NQCYTSQPYKSFCKDCQNSNQNYCTSCYSG--SIFNGQTYNLL 1081
>UniRef50_Q8F8H7 Cluster: Carbonic anhydrase; n=13; Bacteria|Rep:
Carbonic anhydrase - Leptospira interrogans
Length = 750
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -1
Query: 275 TGDWVALVFGWLPLTSTGCRISASVHHLGGRVRRTSAVH 159
TG+ + + G LP+TS R SA++ H G R R +S +H
Sbjct: 315 TGNLCSAILGGLPITSVIIRSSANL-HAGARTRFSSFLH 352
>UniRef50_P37516 Cluster: Uncharacterized protein yyaH; n=28;
Bacteria|Rep: Uncharacterized protein yyaH - Bacillus
subtilis
Length = 126
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 159 MNGGSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNPITGDGYKSMNGQMNT 311
M G+ T P++ M G A+ S G RE + + + DG+ +NG T
Sbjct: 55 MKKGNVTDPPSQTMTGWAHIAFSVGSREKVDELTDRLKADGFAVVNGPRTT 105
>UniRef50_UPI0000DB6E7E Cluster: PREDICTED: similar to CG40191-PB.3;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG40191-PB.3 - Apis mellifera
Length = 347
Score = 30.7 bits (66), Expect = 6.6
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -1
Query: 317 RHCVHLPVHRLVSVTGDWVALVFGWLP 237
++C H+ +H++ +V W++ + WLP
Sbjct: 299 QNCEHIKIHKITNVNWRWLSSIMIWLP 325
>UniRef50_Q58EI6 Cluster: Impa1 protein; n=4; Clupeocephala|Rep:
Impa1 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 746
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 114 SPTPCRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTP 224
SPTP + + QF S N SP+ P+ ++ SAY P
Sbjct: 294 SPTPPKLSRQFRSSPENSQSPSIPPSTSISPSAYPKP 330
>UniRef50_Q4SGD7 Cluster: Chromosome 17 SCAF14597, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14597, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 153
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 142 WMLLRHGVGDQWRNGSIARCLSEKSRVSVTRTCRCVADDAWAR 14
WM LR+ +G + + ++ V+ C CV D+AW R
Sbjct: 105 WMELRYALGRKVGQDYFCWLVPSEACVACVHICVCVCDEAWER 147
>UniRef50_A0JYJ2 Cluster: Putative uncharacterized protein
precursor; n=2; Arthrobacter|Rep: Putative
uncharacterized protein precursor - Arthrobacter sp.
(strain FB24)
Length = 217
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 196 ILAGECVGLPPFISESPNWMLLRHGVGDQWRNGSIARCLSEKSRVSVTRTCRCVADD 26
+ AG VGL + E+P W ++ V + R CL +RV V + VA D
Sbjct: 63 LAAGAAVGLSDGLREAPGWKTIKENVAGENRYLKADGCL-VSARVRVNQAALAVAGD 118
>UniRef50_Q9S9J5 Cluster: T23K8.6; n=2; Arabidopsis thaliana|Rep:
T23K8.6 - Arabidopsis thaliana (Mouse-ear cress)
Length = 296
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 193 LAGECVGLPPFISESPNWMLLRHGVGDQWRNGS 95
LA E PPF S + NW L+ H G++ NGS
Sbjct: 29 LANEKYESPPFSSGAHNWRLVVHPKGNEADNGS 61
>UniRef50_O59826 Cluster: Potassium channel subunit; n=9; cellular
organisms|Rep: Potassium channel subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 344
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 67 ETFRTGSEQWTRFSIDHRHHAAVTSSLV 150
+ F G+ +W+ F I+H HH A +L+
Sbjct: 160 KAFYWGTSEWSAFEIEHAHHIATKYNLI 187
>UniRef50_A4R7R7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 734
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 159 MNGGSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNPITGDGYKSMNGQMNTMT 317
M+ + ++S A G+ TP G+R P H G+P G S+ + + T
Sbjct: 482 MSRAASSNSQAHTPGGTNGLTPGAGDRPPTSHEGDPAKGVSMSSLRRRQSEWT 534
>UniRef50_Q1IUY5 Cluster: Periplasmic sensor signal transduction
histidine kinase precursor; n=1; Acidobacteria bacterium
Ellin345|Rep: Periplasmic sensor signal transduction
histidine kinase precursor - Acidobacteria bacterium
(strain Ellin345)
Length = 484
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 160 ISESPNWMLLRHGVGDQWRNGSIARCLSEKSRVSVTRTCR 41
+ + NWM G+ D + + S+ R LS K R+S R R
Sbjct: 88 LDQDGNWMFRARGMADTFPSPSLPRELSPKGRISTGRDGR 127
>UniRef50_A7CH02 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12D|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12D
Length = 252
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 129 RSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRGE 236
RS + S +GGS SP+ N +YSTP G+
Sbjct: 217 RSLLDCSSSSDSGGSSNDSPSNDSNNDSYSTPCGGD 252
>UniRef50_A3VN11 Cluster: TraH; n=1; Parvularcula bermudensis
HTCC2503|Rep: TraH - Parvularcula bermudensis HTCC2503
Length = 472
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 148 PNWMLLRHGVGDQWRNGSIARCLSEKSRVSVTRTCRCVADDAWARHAVL 2
P+W+ RHG G + ++ S + + S+ + +A DA +H V+
Sbjct: 187 PDWVAARHGCGSEGERSNVLAGASVEEKASIPQNIN-IAWDALKKHPVI 234
>UniRef50_Q2QLK8 Cluster: Expressed protein; n=2; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 826
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +3
Query: 165 GGSPTHSPAKMMNGS----AYSTPSRGEREPAEH*GNP 266
G + HS + N + AYSTP + +++ AEH GNP
Sbjct: 633 GANVNHSSGEATNSAFPDIAYSTPKKKKKKIAEHFGNP 670
>UniRef50_P59047 Cluster: NACHT, LRR and PYD domains-containing
protein 5; n=11; Eutheria|Rep: NACHT, LRR and PYD
domains-containing protein 5 - Homo sapiens (Human)
Length = 1200
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 100 GSIARCLSEKSRVSVTRTCRCVADDAWARHAV 5
G + RCL+ + RV + R CR + W R +V
Sbjct: 514 GVVRRCLNLEERVVLKRFCRMAVEGVWNRKSV 545
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,291,992
Number of Sequences: 1657284
Number of extensions: 7272237
Number of successful extensions: 21018
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21008
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -