Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0002
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   0.99 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    25   3.0  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   7.0  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   9.2  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         23   9.2  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         23   9.2  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   9.2  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   9.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 15/69 (21%)
 Frame = +2

Query: 494 NCPGIIAPEKCKI-------GIMPAA--------VHKRGCIGVVSRSGTLTYEACHQTTI 628
           NC  ++AP   KI       G+ PA         VHK+GC  +VS      Y    QT  
Sbjct: 500 NCKDVLAPHLAKIFNLSLSLGVFPALWKSCWLFPVHKKGCRSIVS-----NYRGITQTCA 554

Query: 629 TGLGQTLCV 655
           T     LC+
Sbjct: 555 TAKTFELCI 563


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +2

Query: 176 GKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPP 352
           G   T H+   L    K V  +    AGT  L      T   +  G+GA A+    P P
Sbjct: 363 GASATPHNMPPLGSLCKTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAPATAKPTPKP 421


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +2

Query: 176 GKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPP 352
           G   T H+   L    K V  +    AGT  L      T   +  G+GA A+    P P
Sbjct: 363 GASATPHNMPPLGSLCKTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAPATAKPTPKP 421


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 415 CNAHNEGHFSLNSF*NGCCSSRGRYINNRGSCSCACLC 302
           C   NE ++S  S     C++  + ++  G C   C C
Sbjct: 25  CTVENEEYYSCASPCRRNCTNLAQMLSCTGVCVSGCFC 62


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 493 RTNQSRLVLSQEGMFYSHHIMLWHTFCNAHNEGH 392
           RTN +  +++  G   SHH    H   N H  GH
Sbjct: 213 RTNNNNTIITDSGHMRSHH---QHYTAN-HQNGH 242


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 318 PVPAFASLTVPNTGLPRCSVPAFFGDT 238
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 318 PVPAFASLTVPNTGLPRCSVPAFFGDT 238
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 318 PVPAFASLTVPNTGLPRCSVPAFFGDT 238
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 318 PVPAFASLTVPNTGLPRCSVPAFFGDT 238
           P P   +LT  N G P C+    F DT
Sbjct: 139 PPPCPPTLTTFNGGQPTCAGKLLFEDT 165


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 318 PVPAFASLTVPNTGLPRCSVPAFFGDT 238
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,548
Number of Sequences: 2352
Number of extensions: 15619
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)