Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0001
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 137 2e-31
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 121 1e-26
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 120 2e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 100 3e-20
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 99 5e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 98 1e-19
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 98 2e-19
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 97 3e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 4e-19
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 97 4e-19
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 97 4e-19
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 96 7e-19
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 95 1e-18
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 93 7e-18
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 92 9e-18
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 92 9e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 91 2e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 90 4e-17
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 90 5e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 85 2e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 84 2e-15
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 83 4e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 83 4e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 83 4e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 83 4e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 83 6e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 83 6e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 83 6e-15
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 82 1e-14
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 81 2e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 81 2e-14
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 73 5e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 73 6e-12
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 66 5e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 61 2e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 2e-07
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 58 2e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 57 3e-07
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 56 6e-07
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 55 1e-06
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 53 5e-06
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 53 7e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 52 2e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 51 2e-05
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 50 4e-05
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 48 1e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 48 1e-04
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 47 3e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 47 5e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 47 5e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 46 6e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 46 6e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 46 8e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 45 0.001
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 45 0.002
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.002
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 45 0.002
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 44 0.002
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 44 0.002
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 44 0.003
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 44 0.003
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 44 0.004
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 44 0.004
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 43 0.006
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 43 0.006
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.010
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 42 0.013
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 42 0.017
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 41 0.030
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 40 0.069
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 40 0.069
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 38 0.21
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 38 0.28
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 38 0.28
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 37 0.37
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 37 0.37
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.48
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 0.64
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 36 1.1
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 36 1.1
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 2.0
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 34 2.6
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 33 4.5
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 33 6.0
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 33 6.0
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 33 6.0
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 137 bits (332), Expect = 2e-31
Identities = 72/132 (54%), Positives = 87/132 (65%)
Frame = -2
Query: 535 MAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILD 356
MAV T TN G S I +R I+E PAKC+EKI STD P CAI
Sbjct: 42 MAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPL 101
Query: 355 ESGG*TVHPVPAPFCTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPII 176
SGG TVHPVP P TI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPPI+
Sbjct: 102 ASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIM 161
Query: 175 IGITIKKNYNKS 140
IG+T+KK K+
Sbjct: 162 IGMTMKKIITKA 173
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 644 IGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNK 537
IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K
Sbjct: 6 IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSK 41
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = -3
Query: 141 ACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 4
A AVT+ L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 173 AWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 121 bits (292), Expect = 1e-26
Identities = 65/110 (59%), Positives = 71/110 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL+LGAPD+AFPR+NN+ F IV+NGAGTG TVYPPLSSNIAH
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHG 136
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 524
G SVDLAIFSLHLAGISS SFDQ+PLFV AVG
Sbjct: 137 GSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVG 186
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRNLNTSFFDPAGGGDPI
Sbjct: 200 AGAITMLLTDRNLNTSFFDPAGGGDPI 226
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHA 59
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 120 bits (290), Expect = 2e-26
Identities = 63/110 (57%), Positives = 71/110 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL+LGAPD+AFPR+NN+ F IV+NGAGTG TVYPPLSSNIAH
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHG 112
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 524
G SVDLAIFSLHLAGISS SFDQ+PLF+ AVG
Sbjct: 113 GSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVG 162
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRNLNTSFFDPAGGGDPI
Sbjct: 176 AGAITMLLTDRNLNTSFFDPAGGGDPI 202
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHA 142
ELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHA 35
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 100 bits (239), Expect = 3e-20
Identities = 56/109 (51%), Positives = 65/109 (59%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL++GAPD+AFPR+NN+ F V+ GAGTG TVYPPL+ N+AH
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHA 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIFSLHLAGISS S Q PLFV +V
Sbjct: 141 GASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSV 189
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPI 230
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHA 63
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 99 bits (238), Expect = 5e-20
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL+LGAPD+AFPR+NN+ F V++GAGTG TVYPPLS N AH
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHA 122
Query: 375 GRSVDLAIFSLHLAGISS 428
G SVDLAIFSLHLAG+SS
Sbjct: 123 GPSVDLAIFSLHLAGVSS 140
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN NTSFFDPAGGGDPI
Sbjct: 186 AGAITMLLTDRNFNTSFFDPAGGGDPI 212
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHA 142
ELG PGS IG+DQ+YN +VTAHA
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHA 45
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 98.3 bits (234), Expect = 1e-19
Identities = 54/109 (49%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL++GAPD+AFPR+NN+ F V+ GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDL IFSLHLAG+SS S Q PLFV AV
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAV 188
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 97.9 bits (233), Expect = 2e-19
Identities = 53/109 (48%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL++GAPD+AFPR+NN+ F ++ GAGTG TVYPPL+ N+AH
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHA 128
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDL IFSLHLAGISS S Q PLFV AV
Sbjct: 129 GASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAV 177
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 51
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDP 624
A IT+LLTDRNLNT+FFDP
Sbjct: 192 AAGITMLLTDRNLNTTFFDP 211
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 97.1 bits (231), Expect = 3e-19
Identities = 51/109 (46%), Positives = 64/109 (58%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N VPL++GAPD+AFPR+NNI F +V+ GAGTG TVYPPL+S AH
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVD+AIFSLHLAG+SS + ++PLFV +V
Sbjct: 141 GGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSV 189
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDR NT+FFDPAGGGDPI
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPI 230
Score = 41.5 bits (93), Expect = 0.017
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHA 142
EL +PGS++GDD +YN IVTAHA
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHA 63
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 96.7 bits (230), Expect = 4e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVP+++GAPD+AFPR+NNI F V+ GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPI 229
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 96.7 bits (230), Expect = 4e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVP+++GAPD+AFPR+NNI F V+ GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPI 229
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 96.7 bits (230), Expect = 4e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVP+++GAPD+AFPR+NNI F V+ GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 95.9 bits (228), Expect = 7e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL++GAPD+AFPR+NN+ F V+ GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSV 188
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 95.1 bits (226), Expect = 1e-18
Identities = 51/109 (46%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL++GAPD+AFPR+NN+ F +V+ GAGTG TVYPPL+ N +H
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHP 139
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSV 188
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHA 62
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 92.7 bits (220), Expect = 7e-18
Identities = 48/109 (44%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N VP+++GAPD+AFPR+NNI F +V+ G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G +VDLAIFSLHL+G+SS + +LPLFV +V
Sbjct: 143 GGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN NT+FFDPAGGGDPI
Sbjct: 206 AGAITMLLTDRNFNTTFFDPAGGGDPI 232
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 92.3 bits (219), Expect = 9e-18
Identities = 51/106 (48%), Positives = 60/106 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL++GA D AFPRINNI F +V++GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
+ IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPI 230
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 92.3 bits (219), Expect = 9e-18
Identities = 51/106 (48%), Positives = 60/106 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL++GA D AFPRINNI F +V++GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
+ IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPI 230
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 91.5 bits (217), Expect = 2e-17
Identities = 50/109 (45%), Positives = 63/109 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N ++PL++GA D++FPRIN+I F +V++GAGTG TVYPPLSS AH
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIFSLHL ISS S ++PLFV A+
Sbjct: 141 GPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
+ IT+LL DRN NTSFF+ AGGGDPI
Sbjct: 204 SAGITMLLMDRNFNTSFFEVAGGGDPI 230
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 90.2 bits (214), Expect = 4e-17
Identities = 49/109 (44%), Positives = 62/109 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N ++PL++GA D AFPRINNI F +V++GAGTG TVYPPL+S AH
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDLAIF+LH+ ISS + +LPLFV A+
Sbjct: 141 GPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
+ +T+LL DRN NTSFF+ AGGGDPI
Sbjct: 204 SAGVTMLLLDRNFNTSFFEVAGGGDPI 230
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 89.8 bits (213), Expect = 5e-17
Identities = 47/106 (44%), Positives = 61/106 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVP+++G+PD+AFPR+NNI F +V+ G GTG TVYPPLSS +H
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
G +VDLAIFSLH++G SS S ++PLFV
Sbjct: 148 GGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFV 193
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN NTSFFD +GGGDPI
Sbjct: 211 AGAITMLLTDRNFNTSFFDASGGGDPI 237
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/78 (52%), Positives = 50/78 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHG 123
Query: 375 GRSVDLAIFSLHLAGISS 428
G SVDL IFSLHLAG SS
Sbjct: 124 GMSVDLGIFSLHLAGASS 141
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN+NTSFFDP+GGGDPI
Sbjct: 187 AGAITMLLTDRNMNTSFFDPSGGGDPI 213
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHA 142
ELG PGSLIG+DQIYN+IVT+HA
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHA 46
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 84.2 bits (199), Expect = 2e-15
Identities = 55/144 (38%), Positives = 67/144 (46%)
Frame = +3
Query: 210 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGRSVD 389
L+LGAPD+AFPR+NN+ F +V+NGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 390 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGXXXXXXXXXXXCFSW 569
LAI+S + + S S + + CFS
Sbjct: 61 LAIYST-VINMRSAGITLDRFFFTFSSNFLNFSITFICMI---CCNYCYFITSFFTCFSS 116
Query: 570 SYYNIINRSKLKYIIF*SCWRRRP 641
S+Y IIN K KY IF W P
Sbjct: 117 SHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+LL DRN NTSFF +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+LL DRN NTSFF +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+LL DRN NTSFF +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+LL DRN NTSFF +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 83.0 bits (196), Expect = 6e-15
Identities = 49/104 (47%), Positives = 57/104 (54%)
Frame = +3
Query: 210 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGRSVD 389
L LGAPD FPR N+ F V+ GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 390 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
LAIFSLH+AG+ S + ++PLFV AV
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAV 107
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN+NTSFFDPAGGGDPI
Sbjct: 122 AGAITMLLTDRNINTSFFDPAGGGDPI 148
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+P+++G PD+AFPR+NN+ + I++NG GTG T+YPPLS +H
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166
Query: 375 GRSVDLAIFSLHLAGISS 428
VDL IF LHL+GISS
Sbjct: 167 SMGVDLGIFGLHLSGISS 184
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A AIT+LLTDRNLNTSF++ AGGGD I
Sbjct: 230 AAAITMLLTDRNLNTSFYELAGGGDAI 256
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/78 (52%), Positives = 50/78 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL LG PD+ FPR+NNI + ++NG GTG T+YPPLS +H
Sbjct: 81 NFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHS 140
Query: 375 GRSVDLAIFSLHLAGISS 428
G SVDLAIF LHL+GISS
Sbjct: 141 GPSVDLAIFGLHLSGISS 158
Score = 49.6 bits (113), Expect = 6e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AG IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 204 AGGITMVLTDRNFNTSFFEVAGGGDPI 230
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 81.8 bits (193), Expect = 1e-14
Identities = 46/109 (42%), Positives = 59/109 (54%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL+LGA D+AF R+NNI F +V+ GAGTG TVY PL+ +H
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G +VDLAIFSLHL+G SS ++ +PLF AV
Sbjct: 146 GPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194
Score = 36.7 bits (81), Expect = 0.48
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+ + DRN NTSFF+ AGGGD +
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAV 235
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 81.0 bits (191), Expect = 2e-14
Identities = 45/109 (41%), Positives = 54/109 (49%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N VP+++GAPD++FPR+NN F + G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G SVDL IFS HL GI S LPLFV +V
Sbjct: 144 GASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A AIT+LL DRN NTSF+DP GGGD +
Sbjct: 207 AAAITLLLFDRNFNTSFYDPVGGGDVV 233
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV----YPPLSSN 362
N L+PL++G PD+AFPR+NNI F I++ G GTG T+ YPPLS
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGL 168
Query: 363 IAHRGRSVDLAIFSLHLAGISS 428
+H G SVDLAIF+LHL+G+SS
Sbjct: 169 QSHSGPSVDLAIFALHLSGVSS 190
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 574 ITILLTDRNLNTSFFDPAGGGDPI 645
IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPI 255
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 73.3 bits (172), Expect = 5e-12
Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQ----NGAGTG*TVYPPLSSN 362
N VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS 179
Query: 363 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
G +VD+AI SLH+AG SS + ++PLFV +V
Sbjct: 180 -GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSV 231
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDP 642
A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 246 AAAITMLLTDRNFGTTFYDAAGGGDP 271
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/109 (33%), Positives = 56/109 (51%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +PL++GAPD+AFPR+NN+ + ++ GAG G T YPP+S+
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
R+VD AIF++H++G SS + ++PLF +V
Sbjct: 246 SRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSV 294
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGAIT+LLTDRN T+FFDPAGGGDPI
Sbjct: 309 AGAITMLLTDRNFGTTFFDPAGGGDPI 335
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/76 (47%), Positives = 43/76 (56%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 381 SVDLAIFSLHLAGISS 428
+VDL IF LHLAGISS
Sbjct: 132 AVDLGIFXLHLAGISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 82 NWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMD 141
Query: 375 GRSVDLAIFSLHLAGISS 428
G +DLA+FSLH+AG+SS
Sbjct: 142 GLPIDLAVFSLHMAGMSS 159
Score = 39.9 bits (89), Expect = 0.052
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A +T+LL DR+ +TSF+ P GGGDPI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPI 232
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS 356
N LVPL++GAPD+AFPR+NN+ F V+ GAGTG TVYPPL+
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHA 142
AELG PG+L+GDDQ N IVTAHA
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHA 63
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 306 IVQNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 428
+V+ G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +P++ G PD+ FPR+NN+ F + + G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 375 GRSVDLAIFSLHLAGISS 428
+ D +F++HL GISS
Sbjct: 143 SLACDFVMFAVHLLGISS 160
Score = 42.3 bits (95), Expect = 0.010
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AG +T++L DRN NTSF+D GGGD I
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLI 232
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISA 121
Query: 375 GRSVDLAIFSLHLAGISS 428
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAH 139
ELG PGSL+ DDQ+YN +VTAH
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAH 45
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/106 (31%), Positives = 46/106 (43%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQP 149
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
S+D I LH GI S + DQ+ +FV
Sbjct: 150 ELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFV 195
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AG++ LL DRN NTSF+D GG+P+
Sbjct: 213 AGSLLFLLLDRNFNTSFYDTKKGGNPL 239
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +P++ G+P++A+PRIN+I + G GTG T+YPPLS+++
Sbjct: 85 NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSL 144
Query: 375 GR-SVDLAIFSLHLAGISS 428
+VD+ IF L ++G++S
Sbjct: 145 SPVAVDVIIFGLLVSGVAS 163
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 568 GAITILLTDRNLNTSFFDPAGGGDPI 645
G + +LL+D + NT FFDP GDPI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPI 235
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 348 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAV 129
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/46 (47%), Positives = 23/46 (50%)
Frame = +2
Query: 170 TYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 307
TYYNW IWKL P NK YKILT PL Y K+N
Sbjct: 24 TYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L P++LG D+ +PR+N ++ G+GTG T+YPPLS+++++
Sbjct: 88 NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147
Query: 375 GRSVDLAIFSLHLAGISS 428
G +D IF L AGI+S
Sbjct: 148 G--IDFIIFGLLAAGIAS 163
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLSSNIAH 371
N L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171
Query: 372 RGRSVDLAIFSLHLAGISS 428
G L + ++ + G+SS
Sbjct: 172 PGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNI 365
N LVP+++GAPD+AFPR+NNI F V+ GAGTG TV LS I
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 50.4 bits (115), Expect = 4e-05
Identities = 32/83 (38%), Positives = 37/83 (44%)
Frame = +2
Query: 161 YSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCTKWCRNRMNS 340
YS TYYN I KL P NK +KIL TPL Y N C+K C + +NS
Sbjct: 53 YSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNS 112
Query: 341 LPPTFI*YRT*RKIRRSCYFFTT 409
LP Y T R +F T
Sbjct: 113 LPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQN-GAGTG*TVYPPLSSNIAH 371
N L+P+++G +++ PR+N I F ++ + +G T+YPPLS+ A
Sbjct: 90 NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149
Query: 372 R-GRSVDLAIFSLHLAGISS 428
G ++DL++ +H+ GISS
Sbjct: 150 NIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-QNGAGTG*TVYPPLSSNIAH 371
N LVP ++GAPD+ +PRIN + F + Q+G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 372 RGRSVDLAIFSLHLAGISS 428
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSP 179
Query: 375 GRSVDLAIFSLHLAGISS 428
G + + L +AGI +
Sbjct: 180 GPGENYYLLGLQIAGIGT 197
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 46.8 bits (106), Expect = 5e-04
Identities = 31/106 (29%), Positives = 42/106 (39%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
+ VD I L + GI S S ++PLFV
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFV 204
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGA-GTG*TVYPPLSSNIAH 371
N +VPL +GA D+AFPR+N + + ++GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 372 RGRSVDLAIFSLHLAGIS 425
G +DLA ++ L +S
Sbjct: 148 PGIGLDLAALAIFLFSLS 165
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 46.4 bits (105), Expect = 6e-04
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+P PD+ FPR+N + F ++ + A G T YPPLSS
Sbjct: 75 NLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----L 125
Query: 375 GRSVDLAIFSLHLAGISS 428
SV+ ++FSLHLAGI+S
Sbjct: 126 SPSVEFSVFSLHLAGIAS 143
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT++LTD++L T F+D GGDP+
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPL 213
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGT-G*TVYPPLSSNIAH 371
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 372 RGRSVDLAIFSLHLAGISS 428
G D+ I + GI S
Sbjct: 165 PGLGSDMWIVGVGATGIGS 183
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 46.0 bits (104), Expect = 8e-04
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI---VQNGAGTG*TVYPPLS--- 356
N L+PL++GA D+AFPRIN I F A TG T+Y PLS
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220
Query: 357 --SNIAHRGRSVDLAIFSLHLAGISS 428
N A+ G VDL + LHL+G+S+
Sbjct: 221 GMGNQANAG--VDLMLLGLHLSGVSA 244
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNI 365
N L+PL+LGA D+AF R+NNI F +V+ GAGTG TV SS +
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 375 GRSVDLAIFSLHLAGISS 428
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 375 GRSVDLAIFSLHLAGISS 428
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQN--GAGTG*TVYPPLSSNIA 368
N +PL++ A D+AFPRIN I F ++ A T T+Y PLS ++
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS 194
Query: 369 HRGRSVDLAIFSLHLAGISS 428
+VD+ + LHL G+S+
Sbjct: 195 --SPAVDMMMLGLHLTGVSA 212
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV 341
N VP+++G+PD+AFPR+NNI F +V+ G G+G TV
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A IT+LL DRN T+FF+P+GGGDPI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPI 319
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +P+ L D+ PR+N++ + G G G T+YPPLS
Sbjct: 178 NYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTLYPPLSI-WEGS 234
Query: 375 GRSVDLAIFSLHLAGISS 428
G VD +FSLHLAG+SS
Sbjct: 235 GFGVDYLMFSLHLAGVSS 252
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 38 NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--ND 95
Query: 375 GRSVDLAIFSLHLAGISS 428
L +F +HL G SS
Sbjct: 96 AGVTALYVFVMHLLGASS 113
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AGA+T+L D+ L T+FF+PA GGDP+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPL 185
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 44.0 bits (99), Expect = 0.003
Identities = 33/106 (31%), Positives = 46/106 (43%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+P+++GA D+AFP++N + F +VQ GA TG T Y P S+ +
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITK 161
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
V L F L G SS + +LPLFV
Sbjct: 162 VVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFV 204
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 43.6 bits (98), Expect = 0.004
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLS--SNI 365
N L+P ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162
Query: 366 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
H L I ++ L+GISS F ++P+FV
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 568 GAITILLTDRNLNTSFFDPAGGGDPI 645
G +LL D + TSFF P GGGDP+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPV 255
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV 341
N L+PL++GA D++F R+NNI F +V++GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N ++PL+LGA D+AFPR+N + ++ G TG T Y P S AH
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHT 165
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
+V +F + G SS ++ ++PLFV A+
Sbjct: 166 TTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAI 214
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 43.2 bits (97), Expect = 0.006
Identities = 30/103 (29%), Positives = 41/103 (39%)
Frame = +2
Query: 107 DQIYNTIVTAHAXXXXXXYSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPY 286
DQIYN IVTA + + +W L P N+ ++L L +
Sbjct: 1 DQIYNVIVTASRFSDDCLHGNANNDSSLWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFH 60
Query: 287 IINFKKNCTKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFS 415
+ K CRNRMN+LP R + YFF+T S
Sbjct: 61 STPSISSSGKSCRNRMNNLPTLIQNNSPRRSVSSPRYFFSTSS 103
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 375 GRSVDLAIFSLHLAGISS 428
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 41.9 bits (94), Expect = 0.013
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 375 GRSVDLAIFSLHLAGISS 428
G VD I+SL LA + S
Sbjct: 204 GIGVDYWIWSLTLASLGS 221
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 41.5 bits (93), Expect = 0.017
Identities = 27/106 (25%), Positives = 41/106 (38%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 98 NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAP 157
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
VD I + L G++S + +++PLFV
Sbjct: 158 TAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFV 203
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 40.7 bits (91), Expect = 0.030
Identities = 29/78 (37%), Positives = 36/78 (46%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKW 152
Query: 375 GRSVDLAIFSLHLAGISS 428
G +L I SL L G SS
Sbjct: 153 GE--ELWILSLLLVGTSS 168
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A A+ +L D TSFF+P GGGDP+
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPV 240
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 39.5 bits (88), Expect = 0.069
Identities = 27/104 (25%), Positives = 38/104 (36%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
LVPL++G IAFPR+N + V G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
D+ + +S+ S D++PLFV
Sbjct: 158 RADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFV 201
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 39.5 bits (88), Expect = 0.069
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQ-NGAGTG*TVYPPLS---SN 362
N L+PL++GA D+AFP +N + + +GA G T YPPLS ++
Sbjct: 114 NFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTS 173
Query: 363 IAHRGRSVDLAIFSLHLAGISS 428
G + L + + G+SS
Sbjct: 174 APSSGAAQTLWLLGVTTVGVSS 195
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 558 CFSWSYYNIINRSKLKYIIF 617
C WSYYN IN SKLKYI+F
Sbjct: 99 CSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/103 (21%), Positives = 42/103 (40%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
+ D + + IS+ S D++P++
Sbjct: 158 NSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
L+PL++GA D+ FPR+ + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 381 SVDLAIFSLHLAGISS 428
S D + + LA I+S
Sbjct: 184 SADFWLIGITLAEIAS 199
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 37.1 bits (82), Expect = 0.37
Identities = 24/103 (23%), Positives = 40/103 (38%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
+ D + + IS+ S ++P+F
Sbjct: 158 NSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIF 200
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 37.1 bits (82), Expect = 0.37
Identities = 24/105 (22%), Positives = 42/105 (40%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N +VPL +GA D++FP +N + F + G T Y LS + +
Sbjct: 91 NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSK 148
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
G +D + L ++G+ + ++ +LPLF
Sbjct: 149 GHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.48
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLSSNIAHRG 377
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 378 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 36.3 bits (80), Expect = 0.64
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGA-GTG*TVYPPLSSNIAH 371
N +VPL+LGA D+A PR+N + GA G T Y P S A
Sbjct: 92 NFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQ 148
Query: 372 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
VD + ++ L G SS S ++P++V +V
Sbjct: 149 SESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSV 198
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/107 (22%), Positives = 41/107 (38%)
Frame = +3
Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
++PL+LG D+ FPR+N + +++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
+D + IS+ S +++P+FV AV
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPP 350
N L+PL++GA D+ FP +N + + V G G G T+YPP
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS 356
N L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
A A+ +LLTDR + FF+PA GGDPI
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPI 231
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/106 (25%), Positives = 41/106 (38%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
N L PL+LG+ D+AFPR+ + + G Y PL+S
Sbjct: 116 NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSA 175
Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
G ++D+ + L GIS+ S D+LP+ V
Sbjct: 176 GANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS----SN 362
N +PL++GA D+AFPR+N + + + T YPP S N
Sbjct: 83 NYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSIITHGN 142
Query: 363 IAHRGRSVDLAIFSLHLAGIS 425
A SV L F+ L G++
Sbjct: 143 TAFYTFSVLLLGFASILGGVN 163
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
AG IT+LL+DRN N FF GG PI
Sbjct: 36 AGTITMLLSDRNFNKFFFILIGGEYPI 62
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSS 359
N LVPL +GA D+AFPR+N + + G T+Y PL++
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,961,965
Number of Sequences: 1657284
Number of extensions: 7956745
Number of successful extensions: 19718
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 18555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19650
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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